Niveibacterium microcysteis: JY500_03485
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Entry
JY500_03485 CDS
T07082
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
niv
Niveibacterium microcysteis
Pathway
niv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
niv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JY500_03485 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
niv03021
]
JY500_03485 (rpoA)
03400 DNA repair and recombination proteins [BR:
niv03400
]
JY500_03485 (rpoA)
Enzymes [BR:
niv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JY500_03485 (rpoA)
Transcription machinery [BR:
niv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JY500_03485 (rpoA)
DNA repair and recombination proteins [BR:
niv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JY500_03485 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
QSI77729
LinkDB
All DBs
Position
742064..743047
Genome browser
AA seq
327 aa
AA seq
DB search
MQSNTLLKPRIIDVQNVSPVHAVVVMEPFERGFGHTLGNALRRILLSSLPGYAPTEVQIE
NVLHEYSTLDGVREDVVDILLNLKGIVFKLHNRTEASLKLSKNGEGVVTARDIETTHDVE
IINPDHVIAHLAPGGKLEMHLKVEQGRGYVPGNMRPAHADAKVIGRILLDASFSPVRRVS
YQVEAARVEQRTDLDRLVMDIETNGAVDPQEAVRFAAGVLRDQLEAFTDLGPTVTATEAP
VQKTTVDPLLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTETELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLEKLG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcaacactcttctgaagccgcgcatcatcgacgtccaaaacgtctccccggtg
catgccgtggtcgtgatggagccgttcgagcgcgggttcggtcataccctgggcaacgcg
ctgcgacgcatcctgctgtcgtcgttgccgggttatgcgccgacggaagtgcagattgag
aacgtgcttcacgagtactccacgcttgatggtgtgcgggaagatgtcgtcgacatcctc
ttgaacctcaagggtattgtgttcaagttgcacaatcgcaccgaggcttcgttgaagctg
tccaagaacggcgaaggcgtcgtgaccgcgcgtgatatcgagacgactcatgacgtcgag
atcatcaacccggatcatgtgatcgctcacctcgccccgggcggtaagcttgagatgcac
ctgaaggttgagcaaggccgtggttacgttccgggcaacatgcgccccgctcacgcggat
gcgaaggtgatcggccgcatcctgctggatgcttcgttcagcccggtgcgtcgcgttagc
taccaggttgaagcggctcgcgttgaacagcgtacggacctcgaccgtctggtgatggac
atcgagacgaacggcgcggtggatccgcaggaagctgtccgctttgcggccggcgtgctg
cgtgaccagcttgaggcctttactgacctcggcccgaccgtcactgcgaccgaagcaccg
gtgcagaagacgacggttgacccgctgctgctgcgtccggtggatgatcttgaactgacg
gtgcgttctgcgaactgcctgaaggccgagaacatctactacatcggtgatctgatccag
cgcacggaaaccgagctgcttaagacgccgaaccttggccgcaagtcacttaacgagatc
aaggaagtgctcgcttcgcgcggcctgacccttggcatgaagctggaaaactggccgccg
gccgggctcgaaaagctcggttga
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