Niveibacterium microcysteis: JY500_04290
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Entry
JY500_04290 CDS
T07082
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
niv
Niveibacterium microcysteis
Brite
KEGG Orthology (KO) [BR:
niv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
niv03016
]
JY500_04290 (truB)
Enzymes [BR:
niv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JY500_04290 (truB)
Transfer RNA biogenesis [BR:
niv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JY500_04290 (truB)
Prokaryotic type
JY500_04290 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Methyltranf_PUA
Motif
Other DBs
NCBI-ProteinID:
QSI77876
UniProt:
A0ABX7M8G4
LinkDB
All DBs
Position
919975..920892
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AA seq
305 aa
AA seq
DB search
MSAQRPARAPRLKVDGVVLFDKPSGMSSNGALQTVRRLYWAAKGGHTGTLDPLASGLLPL
CLGEATKFSQMLLDADKTYLARVKLGVTTTTGDAEGEVTSTRPVVTDDAQIAEVVARFEG
EIDQVPPMYSALKRDGKALYEYAREGVTLERAPRRVTIHRIGCGPLCGDEFDLEVCCSKG
TYIRTLAEDIGEVLGCGAHLVGLRRTAIGPFVIDHAVSLEVLESGEQARADALRPADLLA
SHLPAVPLAPDAAGSFLHGQSVAVPLPPGAVECRVFADGRFLGLGRVDPDGRLAPRRLIA
SVAGA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgcaacggcccgctcgcgcgcctcgattgaaagtggatggggtcgtgttgttc
gacaagccttccggcatgagttcgaacggcgccctgcagaccgtgcgccgcctctattgg
gcggccaagggcggtcatactggcacgctcgatccgctggcgagtggcttgttgccgttg
tgcctgggtgaagccaccaagttcagccagatgctgctcgatgcggacaagacctacctt
gcgcgcgtgaagctcggcgtgacaacgaccacgggcgatgctgagggcgaggtgacgtcc
acacgaccggtggtgaccgacgacgcgcagatcgcggaggtcgttgctcgattcgaaggc
gagatcgatcaggtgccgccgatgtactcggcgctcaagcgcgacggcaaggcgctctac
gagtatgcgcgtgagggtgtgacgcttgagcgggcgccgcgccgcgtaacgatccaccgc
atcggatgtggtccgctgtgcggtgatgagttcgatcttgaagtgtgttgcagcaagggg
acgtacatccggacgctcgcggaagacattggcgaggtgctcggttgtggcgcacatctc
gttggcttgcggcgcactgcaatcggtccgtttgtcatcgatcacgccgtatcgctcgaa
gttcttgaatctggcgagcaggcccgcgccgacgcactgcgtccggccgatctgctcgcg
tcacatttgcctgctgttccgcttgctccggatgcagcaggcagttttctgcacggtcag
tctgtcgctgtcccgctgccgccaggcgcggtggaatgccgtgtatttgccgatgggcgt
tttctcggccttggccgggtggatcccgacggtcggctggcacctcgcaggctcattgcg
agcgtcgcaggtgcttga
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integrated database retrieval system
