Niveibacterium microcysteis: JY500_05780
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Entry
JY500_05780 CDS
T07082
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
niv
Niveibacterium microcysteis
Pathway
niv00300
Lysine biosynthesis
niv00470
D-Amino acid metabolism
niv01100
Metabolic pathways
niv01110
Biosynthesis of secondary metabolites
niv01120
Microbial metabolism in diverse environments
niv01230
Biosynthesis of amino acids
Module
niv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
niv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JY500_05780
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JY500_05780
Enzymes [BR:
niv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JY500_05780
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QSI78149
LinkDB
All DBs
Position
complement(1248702..1249943)
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AA seq
413 aa
AA seq
DB search
MSETRTPPRHVEMSQFPHEGGELLVGGIPLSRLAARVGQTPFYAYDRGLLAARVDTLRST
LPAGIQLHYAMKANPMPALVSFMARLVDGLDVASGRELRVALDTGMDPSEISFAGPGKSL
AELEQAVASNVLLNIESAREARLLSDIGERTGWVARVAVRVNPDFELKSSGMKMGGGPKQ
FGVDAESVPALLAEIGQLGLQFEGFHLYAGSQNLRAESIVEAQRKSFELCVRLAESAPSE
VKSFNLGGGFGIPYFPGEGHLDLAPVADNLAQLQQEAAGKAPGAHLVIELGRYLVGEAGV
YVARVVERKLSRGHVYLVTDGGMHHHLAASGNFGQVIRKNYPVAIGNRMRAGETENVSVV
GPLCTPLDLLADKMDLPPAQEGDLVVVFQSGAYGFTASPRDFLSHPQPLEVLV
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaacgcgaaccccgccgcgccacgtcgagatgagccagtttccgcacgaaggc
ggcgagctactggtcggtggcataccgttgagccgacttgcggcacgcgtggggcaaact
cccttctacgcgtacgatcgcggcctgcttgcggcgcgggtcgatacgcttcgcagcacc
ctgcccgccggcatccagcttcactatgcgatgaaggccaaccccatgccggcactggtg
agcttcatggcgcggctcgtcgatgggcttgacgtcgcgtcgggacgcgaactgcgcgtg
gcactcgataccggcatggacccgagcgagatcagcttcgccgggccaggcaaaagcctc
gcggagctggagcaggcagtggccagcaacgtactgctgaacatcgagtcggcgcgcgaa
gctcggcttctgagcgatatcggtgagcggaccggctgggttgcacgcgtcgcagtgcga
gtgaatccggactttgaactgaagagttccggcatgaagatgggcggcggaccgaagcag
ttcggcgtcgatgccgagagcgtgcctgcgctgctcgccgagatcggccaactgggtctg
cagttcgagggctttcatctttacgccgggtcgcagaacttgcgcgccgaatccatcgtc
gaggcgcagcgcaagagttttgaactctgcgtgcgcctcgccgagtcggccccctccgag
gtcaagagcttcaatctcggcggcgggttcggcattccgtacttcccgggtgagggccat
ctggacctggcgccggtcgccgacaaccttgcacagcttcagcaggaagcggccggcaag
gcgccaggggcacaccttgtcatcgaactcgggcgctacctcgtcggggaggccggcgtg
tacgtcgcccgcgtagtcgaacgcaagctgtcgcgcggccatgtttacctcgttaccgat
ggcggcatgcatcaccacctggccgcatcaggcaacttcggccaagtgatccgcaagaac
tatccggttgcgatcggaaaccgcatgcgtgcgggcgaaactgaaaatgtatcggtcgtt
ggcccgctctgcacgccgctggacttgctggcggacaaaatggaccttccgccggcgcaa
gagggcgatctggtggtcgttttccagtccggtgcctacggcttcacggccagcccgcgc
gacttcctatctcacccgcagccgcttgaggtgctggtatga
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