Niveibacterium microcysteis: JY500_06970
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Entry
JY500_06970 CDS
T07082
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
niv
Niveibacterium microcysteis
Pathway
niv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
niv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JY500_06970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
niv02000
]
JY500_06970
02044 Secretion system [BR:
niv02044
]
JY500_06970
Transporters [BR:
niv02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
JY500_06970
Secretion system [BR:
niv02044
]
Type I secretion system
Adhesin protein transporter
JY500_06970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
Peptidase_C39
DUF6041
Motif
Other DBs
NCBI-ProteinID:
QSI78361
LinkDB
All DBs
Position
complement(1514088..1516253)
Genome browser
AA seq
721 aa
AA seq
DB search
MSDTQPNTKPWEVNEHGVHDDPLLDCLAALTRIHGSPWTHEALAAGLPLVNNRLTPSLLP
RAAARAGLSARLVRQALSAVRPALLPVILLLNDGRACLLLELGEQGDARVRFPEAGETAV
ALSQDELAALHAGVVCYVRPRFRFEARVPEVGKVRARHWFWGAVFSNWRLYRDAVLASML
VNIFALAMPLFSMNVYDRVVPNRAEETLWVLAVGAVLVLGFDLALRTLRAYIIDTAAKRI
DVSLSSKILERVLGMRMESRPESVGSFASNLRAFESVRDFIASATVTTLVDLPFVFVFAF
VVAWLSPWLLLPAFAGAVIVLFLAFVVQDKMHELTETSYRASAQRNATLVESLVGIESIK
TAGAEGWIQRRWERTTLFLAQVGTRSKLLSSLIVNFSQTVQQAVSVVVIITGVYLLLDAK
LSMGGIIAASMLTGRMLAPLGQVVGLLLQYHNARTALTGIEQQMTLPIERPEDAPFLHRA
QFRGEIEFRDVSFQYPGREQYALRRASFRITAGEKVGVIGRVGSGKTTLEKLILGLYQPT
DGAVLVDGIDARQIDPAELRRAVGFVPQDATLFYGSLRQNIALGAPFADDAAILAAADIA
GVTEFANAHPRGFDMPIGERGESLSGGQRQAVAIARALLNDPPMLLLDEPSSNMDHQSED
RLKKKLREFAHAKTLLLVTHRTALLELVDRLIVIDNGQIVADGPKAHVVEALQQGRIGRA
H
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacccagccgaacacgaaaccctgggaggtcaacgagcacggcgtgcatgac
gatccgctgctcgactgcctcgccgccctcacccgtatccacggcagcccctggacccac
gaagcgctggccgccggcctaccgctggtgaacaaccggctgacaccctcactgttgccg
cgtgccgccgcgcgggcaggcctttccgcccgcctggtgcgccaggcgctgtcggccgtt
cgcccggcgctgctgccagtgatcctgctgctcaacgacggccgcgcctgcctgctgctt
gaactgggcgagcaaggcgatgcgcgggtgcgcttccccgaggccggcgagaccgccgtc
gcgctcagccaggacgaactcgcagccctgcatgccggcgtggtctgctatgtgcgcccc
cgcttccgcttcgaagcacgtgtacccgaagtcggcaaggtgcgcgcgcggcactggttc
tggggtgcggtgttttccaactggcggctgtaccgggacgcggtgttggcctcgatgctg
gtgaacatcttcgcattggcgatgccgctgttctcgatgaacgtgtacgaccgcgtcgta
cccaaccgtgccgaggaaaccctctgggtcctcgcggtgggcgcggtactcgtactcggc
ttcgacctcgcgctgcgaacgctgcgcgcctacatcatcgacaccgccgcgaagcggatc
gacgtgtcgctgtcgtcgaagatcctcgaacgcgtgctgggcatgcggatggagtcgcgc
cccgaatccgtcggttcgtttgcgtcaaacctgcgggcgttcgagagcgtgcgcgacttc
atcgcctcggccaccgtcaccacgctggtcgacctgcccttcgtgtttgtctttgccttc
gtcgtggcctggctgtcgccctggctgctgctacccgcattcgccggtgcggtgatcgtg
ctgttcctcgccttcgtggtgcaggacaagatgcacgaactgaccgagacgagctatcgc
gccagcgcccagcgcaacgccacactggtcgagagcctggtcggcatcgagtcgatcaag
accgctggcgccgagggctggatccagcgccgctgggaacggaccacgctgttcctcgcc
caggtcggcacgcgctccaagctgctctcttcgctgatcgtcaacttctcgcagacggtg
cagcaggcggtgtcggtggtggtgatcatcaccggcgtgtatctgctgcttgatgccaag
ctctcgatgggcggcatcatcgccgcaagcatgctgaccggccggatgctggcgccgctg
ggccaggtggtcgggctgttgctgcagtatcacaacgcacgcaccgcactgaccggcatc
gaacagcagatgacgctgccgatcgaacgccccgaagacgcacctttcctgcaccgagcc
cagttccgcggcgaaatcgaattccgcgacgtgagcttccagtatccgggccgcgagcag
tacgcgctgcggcgggcttcgttccgcatcactgccggcgagaaggtcggcgtgatcggg
cgcgtcggctccggcaagacgacgctggagaaactgatcctcggcctctatcaaccaacc
gatggcgcagtgctggtcgatggcatcgacgcgcgccagatcgatccggccgaattgcgc
cgcgcggtgggcttcgtgccgcaagacgccacgctgttctacggcagcctgcgccagaac
atcgcgctgggcgcgcccttcgccgacgatgcggcgatccttgcggctgcggacatcgcc
ggcgtcaccgagtttgccaatgcgcatccgcgtggcttcgacatgccgattggcgagcgc
ggcgaatcgctatcgggcgggcagcggcaggcggtcgcgatcgcgcgcgccttgctgaac
gatccgccgatgctgctgctcgacgaaccctccagcaacatggatcaccagagcgaagac
cggctcaagaagaagctgcgcgagttcgcgcacgccaagacgctgctgctggtcacgcac
cgcaccgcactgctggaactggtggaccgcctgatcgtcatcgacaacggccagatcgtc
gctgacggccccaaggcgcacgtcgtggaagccctgcagcaaggccgtatcgggagggcg
cactga
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