Niveibacterium microcysteis: JY500_07540
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Entry
JY500_07540 CDS
T07082
Name
(GenBank) PAS domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
niv
Niveibacterium microcysteis
Pathway
niv03030
DNA replication
niv03430
Mismatch repair
niv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
niv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JY500_07540
03430 Mismatch repair
JY500_07540
03440 Homologous recombination
JY500_07540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
niv03032
]
JY500_07540
03400 DNA repair and recombination proteins [BR:
niv03400
]
JY500_07540
Enzymes [BR:
niv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JY500_07540
DNA replication proteins [BR:
niv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JY500_07540
DNA repair and recombination proteins [BR:
niv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JY500_07540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
PAS_4
PAS_8
DNA_pol_A_exo1
RNase_H_2
HisKA
PAS
PAS_7
DUF7979
Motif
Other DBs
NCBI-ProteinID:
QSI79156
UniProt:
A0ABX7MDL2
LinkDB
All DBs
Position
1642467..1644374
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AA seq
635 aa
AA seq
DB search
MADDVELVLGGQHGRAIEPSGAPELVELAGRVNRLIIAFEAARRDAELRAEQARATVERE
RNQLAALVTEMPQGVLACNREGRILLYNGHARDLFGGIGDGGLIGLGRPIESVFDRRLLA
HTRDRLWRQMARVNGRVVVSFVTATAAGRLIRARVSPVLDADTERPVMERLNGYLILTED
ITRESEQAARRDRLVELLTQSQRGGLASIRAAAENLIEFDDLDASQQRRFLQVIRDEAVR
LGERVSDTAREFSDVLRGNTALEAMHGVDLVGAAQRRIEARTGMLTKLDDVDAEIWLRVD
SFAIVQVLTVLAQRVYESIEPREVRLALRGDASMAQVELSWGGTALSSESAAGWEMEPML
LAGETSPRSIREVLRRHEGELAYGRERASARSWFRVLLPRAGAGDEVQSGPESDGARPEF
YDFDLFAWGERGRALEDRPLAELAYTVFDTETTGLDPSAGDEIIQIGAIRIVNGRLLRGE
RFEQLVDPRREIDPASEAIHGISRERLRGEPDILTVLPRFHAFAHETVLVGHNAAFDMRF
LQLKEAATGLRFDQPVLDTLLLSAVLHPNQETHKLDAIAERFGVPLLDRHDAAGDALVTG
QLFLRMIPLLAERGIVTLGEAREASEKTFYARIRY
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgatgttgaactggtgctgggtggccagcatgggcgtgcgatcgaaccgagc
ggtgcgcccgagctcgtcgaacttgccggtcgcgtaaatcgcctgatcattgccttcgag
gccgcgcggcgcgatgccgagttacgagccgagcaggcgcgcgcaaccgtggagcgcgag
cgcaaccagctcgccgcactggtcaccgagatgccgcaaggcgtgctcgcctgcaaccgg
gaagggcgcatcctgctctacaacggccatgcgcgcgatctgttcggcggcatcggcgac
ggtggtctgatcggactcgggcggccgatcgaatcggtgtttgaccgccgcctgctcgcg
cacacgcgcgatcggctgtggcgccagatggcgcgcgtgaacgggcgcgtggtggtcagt
ttcgtcactgcgaccgccgccgggcgcctgatccgcgcccgagtgtcgccggtgctcgac
gctgataccgaacggccggtcatggagcgcctgaacggctatctgatcctcaccgaagac
attacgcgcgagtctgagcaggcggcacggcgcgatcgcctggtcgagctgctgacgcaa
tcgcagcggggcgggcttgccagcatccgcgcagcggccgagaacctgattgaattcgat
gacctggacgcgagccagcagcgccgcttccttcaagtgatccgcgatgaggcggttcgc
cttggcgagcgggtgagcgacacggcgcgcgagttttccgacgtgttacgcggcaacacc
gcgctggaggcgatgcacggggtcgacctcgtcggcgcggcgcagcgtcgcatcgaggcc
cgcaccggcatgctgaccaagctcgacgacgtcgatgccgagatctggctgcgcgtcgat
agttttgcgatcgtgcaagtgctgacggtgctcgcccagcgggtgtacgaatcgatcgag
ccgcgcgaagtgcgccttgcgctgcgcggcgatgccagcatggcgcaggttgagttgtcg
tggggcggcacggcgctgtcgagcgaatcggccgccggctgggaaatggagcccatgctg
ctggcgggcgagaccagcccacgctcgatccgcgaggtgttgcggcgccacgaaggcgag
ctcgcgtacgggcgcgagcgtgcgagcgcgcggtcgtggttccgcgtgctgttaccgcgt
gcgggcgctggcgacgaagtccagagtgggcctgagagcgatggggcgcggccggagttc
tacgactttgaccttttcgcgtggggtgagcggggccgggcgctggaagaccgcccgctc
gcggagttggcctacaccgttttcgataccgagaccacgggtctggacccgtccgccggt
gacgaaatcattcagatcggtgcgattcgcatcgtcaatggccgcctgctgcgcggtgaa
cgttttgagcaactggtcgatccgcgtcgggagatcgaccccgcttcggaggcgatacac
ggcatctcgcgcgaacggctgcgcggcgagccggacatcctgaccgtgctgccgcgcttt
cacgcttttgcgcacgagacggtgctggtggggcacaacgccgccttcgacatgcgtttc
cttcaattgaaggaggccgcgacggggctgcgctttgatcagccggtgcttgatacgctg
ctgctttccgccgtactgcacccgaaccaggaaacccacaagctcgacgccattgccgaa
cgcttcggcgtacccttgctggaccgccacgacgcggctggcgacgcgctggtgacgggg
cagttgttcctgcgcatgatccccttgcttgccgagcgcggtatcgtgacccttggcgaa
gcacgcgaagcctccgagaaaaccttctatgcccgcatccgatactga
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