Niveibacterium microcysteis: JY500_09640
Help
Entry
JY500_09640 CDS
T07082
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
niv
Niveibacterium microcysteis
Pathway
niv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
niv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JY500_09640 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
niv03019
]
JY500_09640 (pcnB)
Enzymes [BR:
niv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
JY500_09640 (pcnB)
Messenger RNA biogenesis [BR:
niv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JY500_09640 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF2204
Motif
Other DBs
NCBI-ProteinID:
QSI78845
LinkDB
All DBs
Position
complement(2121321..2122679)
Genome browser
AA seq
452 aa
AA seq
DB search
MIRKLLRRVFRRDPVTATALRSIEPAIIPVAQHGITRDRISPASRRVCGTLQEAGFKAFV
VGGAVRDLIAGITPKDYDVATDATPDQVRELFRRSRIIGRRFRIVHVMSGPETIEVSTFR
ASQSEDTNTDEHGRILADNVWGSQAEDATRRDFTINALYYDPSSETVIDYHHGVGDLKQK
TLRMIGDPVTRYREDPVRMLRAVRMAAKLGLVIDPAARKPILELAELLENVPPARLFDEM
LKLLTSGHAVACLKQLREEGLHTGLLPLLDVILQQPMGERFVWLALENTDDRVRAGKPVS
PGFLFATLLWHEALASWEARKARGEPSQAALFDAMSEVLDQQAEKLAITRKISADIKEIW
ALQPRFERRAGKAPHRLLEQPRYRAGYDFLRLRALSGEVPMELAEWWNDFADANPDSRET
MLVPDRDGIAKKRRRRRRKPGGAADNAASGKE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcaagcttctgcgccgtgttttccgccgcgatccggtaaccgccaccgcgctt
cgctccatcgaaccggccatcattccggttgcccagcacggcattacgcgcgatcgcatt
tcgccggcgtcccggcgtgtatgcggcacgctgcaggaagcgggtttcaaggccttcgtt
gtgggcggcgcagtacgcgacctgatcgccggcatcacgccgaaggattacgacgtcgcc
accgatgccacgcccgatcaggtgcgcgagctgttccgccgctcgcgcatcatcggccgc
cgcttccgcatcgtgcatgtgatgagcgggccagaaacgatcgaagtctccaccttccgc
gcgtcgcagagcgaagacaccaacaccgacgaacacggccgcatcctcgccgacaacgtg
tggggctcgcaggccgaagacgcgacgcgacgcgatttcacgatcaacgcgctgtactac
gacccgagcagcgaaacggtgatcgactatcaccacggcgtcggcgacctcaagcagaag
acgctgcgcatgatcggcgacccggtcacccgctaccgcgaagacccggtgcgcatgctt
cgcgcagtgcgcatggcggccaagctgggcttggtcatcgaccctgccgcgcgcaagccg
atcctggaactggccgagctgctcgaaaacgtaccgccggcccggctgttcgacgaaatg
ctcaagctgctgaccagcggacacgccgtcgcgtgcctcaagcagttgcgcgaggaaggc
ctgcataccggcctgctgcccttgctggacgtgatccttcagcagccgatgggcgagcgt
ttcgtctggcttgcgctggagaacaccgacgatcgcgtgcgtgccggcaaaccggtatcg
cccggtttcctgttcgccaccctgctgtggcacgaagcactggccagttgggaagcacgc
aaggcacgcggcgagccctcgcaggccgcgctcttcgacgcgatgtcggaggtgctggat
cagcaagccgagaagcttgcgatcactcgcaagatttcggccgacatcaaggaaatctgg
gccctgcagccgcgcttcgagcggcgcgcaggcaaggcgccacatcgcctgctcgaacag
ccgcgctatcgcgctggttacgacttcctgcggctgcgcgcgctgagcggcgaagtgccg
atggaactcgccgaatggtggaatgattttgccgacgccaatccggattcgcgcgagacc
atgctggtgcccgaccgcgacggcattgccaagaagcgtcgccgccgtcgccgcaaaccg
ggcggtgccgccgacaacgccgcgtcaggcaaggaatga
DBGET
integrated database retrieval system
