Niveibacterium microcysteis: JY500_12115
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Entry
JY500_12115 CDS
T07082
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
niv
Niveibacterium microcysteis
Pathway
niv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
niv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JY500_12115 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
niv03400
]
JY500_12115 (recC)
Enzymes [BR:
niv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
JY500_12115 (recC)
DNA repair and recombination proteins [BR:
niv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JY500_12115 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Methyltransf_12
SOGA1-2-like_CC
Motif
Other DBs
NCBI-ProteinID:
QSI75264
LinkDB
All DBs
Position
2664693..2668013
Genome browser
AA seq
1106 aa
AA seq
DB search
MPIRVSFANRIETLEQILLARLQAEQPGPFDRQTVIVPNTAVRRRIELDMADRFGLCAQV
DFPFLGQWLWQEVGQWMPAPERSPLDTGRLTWAILVQLNDGDFVRSHPGVAGYLADADAV
MRFELAEQVARVFTDTVTYRPDWVEQWRLRRALPLPAGNDHDTADWLGDLWRRVTSALGV
AGQHPFIRLLQEQPQRAAAPADCGPVHVFALPALPPLHLDLLRAFADYREVQLYVLNPCR
EHWFEIVPARRLSFLAAQGRSDFHEVGNRLLAAWGRQTQAHIDLLFENDDALEEADSRFD
EATAATLLGHVQNAVLDLQELGPASFALEADDRSIEVHVCHSLTRQLEALQDRLLALLGA
SSAAPGSPIRPSDVLVVVPDLATAAPLIDAVFGTAPPARRIPYTITGRGQTREHVVASTL
AALLDLLPGRFPASAVFDLLQLAPIAARYQLDDAALETVRDWVASAGIRWGLDARQRGEL
GLPEHDVHSFADGLERLFLAYALGDDAVFAGRTGAANPEGQAAQALGQLWRFVQDLADTR
LRWRTPRSAEAWRGELDELLARYIPPSFEWAEDLRTLRATMAELHRHMDAAGDADLTPDI
VIRALADLLEQPARGGVPTGGVTFAAMASLRPLPYRVVCALGMDDGAFPGTDRPAEFDLL
ARHPRRGDRQRRFDDRNLFLDLLLSARDHFILAYTGRSLRDNAALPPSVLVAELLDALAE
LTATDTSPEAIAAARARLLVEHPLQPFALDLFLPGADPRLHSHNAELCDALRAGLSNAQR
APGTPLGPSSSDADDEREAQDETSTAPPFFTTPLAIDASLRDVPLDHFIRFFRNPSRSLL
RERLGIQLAKGEDALADEEPFVADYEGIRALFQRLEADVLAGSSIDQLRARVAAGNEYPH
GALGNVQRADVVAQLAAFSQKLQPLRDEAALAPVPIALNFDLAGETWRLSGNLAGLRASG
QYRYRLDALRAADRVEAILHHLVLCAAAPSGVVASTQHLASDETLTLAPLAPASALAHLQ
SLLGWYRLGQTRPLHFYPKSAWAYVESGQRLSEARKKWESAMFAGENEDPHYQFALRGVA
DPLDAEFEQVAVDVFGLLITDAERTA
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgccgatccgcgtcagcttcgccaaccgcatcgaaacccttgaacagatcctgcttgcc
cgccttcaggccgagcagcccggcccgttcgaccggcagacggtcatcgtgccgaatacg
gccgtgcgccgccgtatcgagctcgacatggcggaccgtttcgggctctgcgcccaagtg
gactttcccttcctcggccagtggctgtggcaggaggtcgggcagtggatgccggcacca
gagcgctcaccgctcgacaccggccggctgacatgggcgattctggtgcaattgaacgac
ggggatttcgtgcgcagtcaccccggcgttgccggctaccttgccgatgccgacgcggtg
atgcgcttcgaactcgccgagcaagtcgcccgcgtctttacagacaccgtgacctaccgg
cccgactgggtggaacagtggcgactgcgtcgcgcactgccgctgcccgccggaaacgat
cacgacactgccgactggctgggtgacttgtggcgccgggtgaccagcgcattgggcgtc
gccgggcagcacccgttcatccgcctgttgcaggaacaaccccagcgcgccgccgcgccg
gccgactgcggcccggtgcatgtattcgccctgcccgccctgcccccgctgcaccttgac
ctgctgcgcgccttcgcggactaccgcgaggtgcagctctacgtgctcaatccctgccgc
gagcactggttcgaaatcgtaccggcacgccgcctcagctttctcgccgcgcagggccgg
tccgactttcacgaggtcggcaaccgcctgctcgctgcctgggggcggcagacgcaggct
catatcgacctgctgttcgaaaacgacgacgcccttgaagaagccgacagccggttcgac
gaagccacggccgccacgctgctgggccatgtgcagaacgccgtactcgacctgcaggaa
ttggggccggcaagtttcgccctggaagcggacgaccgcagcatcgaagtccatgtgtgc
cattcgctcacccgccagctcgaagccttgcaggaccggcttctggcgctgcttggcgcc
agttcagccgcgccgggctcgccgatccggccgagcgatgtgctggtcgtggtgccggat
ctcgctaccgccgcgccgctgatcgacgccgtgttcggcaccgccccgccggcacggcgc
atcccctacaccattaccggccgcggccagacgcgcgagcacgtcgtcgcgagtacgctc
gccgccttactcgatctgctgccgggccgcttcccggccagcgcggtgttcgatctgctg
caactcgcgccgattgcggcgcgctatcagctcgacgacgcggcactcgaaacggtacgc
gactgggtcgccagcgccggcatccgctgggggctcgacgcccgccagcgcggcgaactg
ggcctgccggaacacgatgtgcacagcttcgccgatgggttggagcggctcttcctcgcc
tacgcgctcggcgacgacgccgtgttcgccggccgaaccggcgccgccaatcccgaaggg
caagccgcgcaggcgctcggccagctctggcgcttcgtacaggatctggccgacacgcgg
ctgcgctggcgcacgccgcgcagcgccgaagcctggcgcggtgagctggacgagctgctc
gcacgctacatccccccgagcttcgaatgggcggaagatctgcgcaccctgcgcgccacg
atggccgagctgcatcggcatatggatgcggccggcgacgccgaccttacgccagacatc
gtgatccgcgcgctcgccgatctgctcgaacagcctgcgcgcggcggggtgcccactggc
ggcgtcaccttcgccgcgatggccagcctgcgccccttgccctaccgggtggtctgcgcg
ctgggcatggacgacggcgccttccccggcaccgaccgcccggcggaatttgatctgctc
gcgcgccacccgcgccggggcgaccgccagcgccgcttcgacgaccgcaacctgttcctc
gacctgctgctcagcgcgcgggatcacttcatcctcgcctacaccggccgcagcctgcgc
gacaacgccgcgctgccgccctcggtactcgtggcggaactgctcgatgcgctcgccgag
ttgaccgcgaccgatacctcgccggaggccatcgccgctgcgcgcgcccggctcttggtg
gaacacccgctgcaacccttcgcgctggatctcttcctgcccggcgccgacccccgcctg
cacagccacaacgcagaactctgcgacgcgctgcgcgcgggcctctccaacgcacagcgc
gcgcccggaacgccgctcgggccttcgtcttccgatgcggacgatgagcgcgaggcgcag
gacgaaaccagcacggccccgcccttcttcaccaccccactcgccatcgacgcttcactg
cgagacgtgccgctggaccacttcatccgcttcttccgcaacccatcgcgttcgctgttg
cgcgagcggctcggcatccagctcgccaagggtgaagacgcgctggcggacgaggaaccc
ttcgtcgccgactacgaaggcatccgtgccctcttccagcggctggaggctgacgtactt
gccggcagttcgattgatcaactgcgcgcccgcgtcgcagcgggtaacgaatatccgcac
ggcgccttaggcaacgtgcagcgggccgatgtggtggcgcagctcgccgccttttcgcag
aagctgcaacctctgcgcgacgaagcggcgctggcgccggtgcccatcgcgctgaacttc
gatctggccggcgagacatggcgcctgagcggcaacctcgccgggctgcgcgcgagcggt
cagtaccgctaccgactcgacgccctgcgcgcggccgaccgcgttgaggcgatcctgcat
cacctggtgctctgtgccgccgcgccgagcggcgtggtcgcaagcacgcagcacctcgcc
agcgatgagacgctgaccctggcgccactggcccccgccagcgcgctcgcccacctgcaa
agcctgcttggctggtatcgcctcggccagacacggccgctgcacttctacccgaagagt
gcctgggcctatgtggagagcggccaacgcctctcagaagcccgaaagaagtgggagagc
gcgatgttcgccggtgagaacgaagacccgcactaccagttcgcgctgcgcggcgtcgcc
gacccgctggatgcagaattcgagcaagtcgcggtggatgtgttcggcctgctgatcacc
gacgcggagcgcacggcatga
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