Niveibacterium microcysteis: JY500_16260
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Entry
JY500_16260 CDS
T07082
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
niv
Niveibacterium microcysteis
Pathway
niv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
niv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JY500_16260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
niv02022
]
JY500_16260
02035 Bacterial motility proteins [BR:
niv02035
]
JY500_16260
Two-component system [BR:
niv02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
JY500_16260
Bacterial motility proteins [BR:
niv02035
]
Pilus system
Twitching motility proteins
JY500_16260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_19
HTH_50
HTH_30
AAA_5
FleQ
HTH_28
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QSI76013
UniProt:
A0ABX7M2L5
LinkDB
All DBs
Position
complement(3578200..3579582)
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AA seq
460 aa
AA seq
DB search
MSSASERRSHIDAAVLIVDDEADIRELLELTLLRMGLGADAAGTLADARALLAEHRYKLC
LTDMRLPDGDGLTLVREIAQHHPELPVAVITAYGSMENAVTALKEGAFDYLSKPVSLEQL
RALVKSVFDLPKRASESRPVGASSLTGESPTMLQVRSMIERLARSQAPVYISGESGSGKE
RAARLIHEYGPRAAKPFVAVNCGAIPENLMESEFFGYRKGAFTGADADRDGFFQAANGGT
LFLDEVGDLPLPMQVKLLRAIQEKRVRRVGDTAEQPVDLRIISATHRNLKELVDQGRFRQ
DLFYRLNVIELRMPALRERREDIPALVDALLGRLAQEAGLPVPRVDAAANAALLAYAFPG
NVRELENILERALALHGGQCITVEDLHLEPREEEAGPHGIPGGGVALERESLQDYLDRVE
RQAINEAIAKTDGNRTAAARLLGVTFRSLRYRMERLGMKE
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgcaagtgagcgacgcagccacatcgatgcagcggtactgattgtcgatgac
gaggcggatatccgtgaattgctggagctgacgcttctgcgcatggggcttggtgccgac
gcggctggaacgctggccgacgcgcgcgcattgctggcggagcaccgctacaagctgtgc
ttgaccgacatgcgcctgccggacggcgatggcctcacactggtgcgagaaattgcgcag
caccatccagaactgccagtggcggtgatcacggcctacggcagcatggagaacgcagtc
accgcgttgaaggagggggccttcgactacctctccaaacccgtttcgcttgaacaactg
cgagccctggtcaaatcggtcttcgatctgccgaagcgcgcgagtgaatcacgcccggtc
ggcgccagttcgttgaccggcgagtcgcccaccatgctgcaagtgcgcagcatgatcgaa
cgtttggcgcgcagtcaggcgccggtctatatcagcggtgagtcgggcagcggcaaggag
cgcgcggcgcgcctgattcacgaatacggcccgcgtgccgcgaagcccttcgttgcggtc
aactgcggagcgattcccgaaaatctcatggagagcgagttcttcggctatcgcaaggga
gcttttaccggcgcggatgctgaccgcgatggcttcttccaggcagccaacgggggcacc
ttgttcctcgatgaagtgggtgacctgccgttgcccatgcaggtaaagcttctgcgtgct
atccaggaaaagcgtgtgcgccgtgtcggcgacacggccgagcagccggtggatctgcgc
atcatcagcgcgacgcaccgcaatctgaaggagctcgtggatcaagggcggttccggcag
gatctgttctaccgcctcaacgtcattgaactgcgcatgccagcgctgcgcgagcggcgt
gaggacatcccggccctggtcgatgccttgcttgggcgattggcccaggaggcgggcttg
cctgtgccgcgtgttgacgccgctgcgaacgccgccttgttggcctatgcattcccgggc
aacgtgcgcgaactggagaacattcttgaacgcgcgttggccttgcatggcggccaatgc
attacggtcgaggatcttcacctcgaaccgcgcgaggaggaggccggtccgcacggcatt
ccgggtggcggcgttgccctggagcgggaatccctgcaggactatctcgaccgcgtcgag
cgccaggccatcaacgaagccatcgccaagaccgatggcaaccgcacggccgcggcgcgg
cttctgggcgtgaccttccgttcgctgcgctaccgcatggagcggctggggatgaaggag
taa
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