Niveibacterium microcysteis: JY500_19795
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Entry
JY500_19795 CDS
T07082
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
niv
Niveibacterium microcysteis
Brite
KEGG Orthology (KO) [BR:
niv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
niv03016
]
JY500_19795
Enzymes [BR:
niv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
JY500_19795
Transfer RNA biogenesis [BR:
niv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
JY500_19795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
QSI76676
LinkDB
All DBs
Position
4367502..4369409
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AA seq
635 aa
AA seq
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MHVLFEEDGAFKPATILTQTDTSLQVETPHGKRVKLKTANVLMRFDRPAAGDLMAAAERE
AEGLETEFLYEVCGDDEFAFTDLAQDYFGHVPNAVESVALLLKLQASPIHFHRKGKGRFR
KAPPEILQAALAGLEKKRLQQETVERYASELEAGRLPPEVAAIVTQLLVKPDRNRLETKG
VELACERSGRTLPQLLLACAAFPNAHAYHRARFLSEHFPDGIEFPPHEVPAPVHALSRAD
VRAFSIDDATTTEIDDAFSITPRAAGGWHIGIHIAAPGIGIPQGAPLDAVARKRLSTVYM
PGDKITMLPDDAVSAYTLSEGRDCPAVSLYVDVNADYSIAGHSSRVEIVPVIANLRHHDI
EPWFNETTLAAELPNAPWRDELKLLWEFATVLEAGRGKPSANQNAFDFNFYVDWDVETAD
GPGLVDIQRRKRGSPLDKLVAELMILANSTWGRVLADAGIPAIYRAQTGGRVRMTTAAAP
HDGLGVDCYAWSSSPLRRYVDLVNQRQLIALLSNEPAPFGKGSAELAAAMNDFELAYAAY
ADYQRQMERYWCLRWLRQKGPDYQPEGHVWRENLVRFNDIPLVVKVPSLPNLDAGTHIRL
AIERYDDLAPDLVARYVETLAPDADVLTTDEEDGL
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtgctgttcgaagaggatggggccttcaagcccgccacgatcctcacccaaacc
gatacctcgcttcaggtggaaacaccgcatggcaagcgggtgaagctcaagaccgccaac
gtgctgatgcgtttcgaccggccggcggcgggcgacctgatggccgccgcggaacgcgaa
gccgaagggctggaaaccgaattcctgtacgaagtgtgtggcgacgacgaattcgccttc
accgatctggcgcaggattacttcggccatgtgccgaatgcggtggagtcggtcgcgctg
ctgctcaaactccaggcctcaccgatccacttccaccgcaagggcaagggccgcttccgc
aaggcgccgcctgagattcttcaagccgcgctggccgggcttgagaagaagcgcctgcag
caggaaaccgtggaacgctacgctagcgaactcgaagcgggtcgtttgccgccggaagtc
gccgcgatcgtcacgcaactgctggtcaaaccggatcgcaaccggctcgagaccaagggc
gtggaactcgcctgcgaacgcagcggccgcaccctgccgcaactgctgctcgcctgcgcc
gccttcccgaacgcccacgcctaccaccgcgcacgcttcctgtcggagcacttccccgac
ggcatcgagtttccgccgcacgaagtgcctgcgccggtgcacgcgctgtcgcgcgccgac
gtgcgcgccttctcgatcgacgacgccaccaccaccgaaatcgacgatgcgttctcgatc
acgccgcgcgccgctggtggctggcatatcggcatccatatcgccgcaccgggcatcggc
atcccgcagggtgcgccgctcgacgccgtggcgcgcaagcgtctctccacggtgtacatg
ccgggcgacaagatcacgatgctgccggacgacgcggtgtcggcctacaccctctccgag
ggacgtgattgcccggccgtgtcgctgtatgtggacgtcaatgccgactactcgatcgcg
ggccattcgagccgggtcgagatcgtgccggtcatcgccaacctgcgtcatcacgacatc
gaaccctggttcaacgagaccacactcgccgccgaactgccgaacgcaccgtggcgcgat
gaactgaaactgctgtgggagttcgccaccgtgcttgaagccggccgcggcaagccttcg
gcgaaccagaacgccttcgacttcaatttctacgtcgactgggatgtggaaacggctgac
ggccccggcctcgtcgatatccagcgccgcaagcgcggctccccgctcgacaagctggtt
gccgagctgatgatccttgccaacagcacctggggccgcgtgctggccgatgccggcatc
cctgcgatctaccgtgcacagaccggcggccgcgtgcgcatgaccaccgccgccgcgcca
cacgatggcctgggcgtcgattgctatgcgtggtcgagctcaccgctgcgtcgctacgtc
gatctagtcaaccagcgccagctgatcgcactgctatcgaacgagcccgcccccttcggc
aaaggctcggccgaactcgccgccgcgatgaacgactttgaactcgcgtacgcggcctat
gcggactaccagcgccagatggaacgctactggtgcctgcgctggctgcgtcagaaaggc
ccggattaccagccggaagggcatgtctggcgtgagaacctcgtgcgcttcaacgacatc
ccgctggtcgtcaaggtgccgtcgctgcccaacctcgatgccggcacgcatatccgcctc
gcgatcgaacgttacgacgacctcgcgcccgacctcgtggcccgctatgtggagacgctc
gcgcctgatgccgatgtcctgacgacggacgaggaagacggcctgtaa
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