Candidatus Nitrosopumilus sp. SW: Nisw_02345
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Entry
Nisw_02345 CDS
T06175
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
niw
Candidatus Nitrosopumilus sp. SW
Pathway
niw00860
Porphyrin metabolism
niw01100
Metabolic pathways
niw01110
Biosynthesis of secondary metabolites
niw01120
Microbial metabolism in diverse environments
niw01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
niw00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Nisw_02345 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
niw04147
]
Nisw_02345 (hemB)
Enzymes [BR:
niw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
Nisw_02345 (hemB)
Exosome [BR:
niw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Nisw_02345 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
YAcAr
Motif
Other DBs
NCBI-ProteinID:
QDI88453
LinkDB
All DBs
Position
373767..374747
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AA seq
326 aa
AA seq
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MSFPTRRLRRLRTSGKMRELVQQTTLSPKDFICPVFVQEDLKTRTKVESMTAIERLPLED
VNDEVGTISDLGIPAIMLFGIPTQKDDAGSSAFDDNGIVQKAISQIRENFGDKMVIMADV
CLCQFTSTGHCGIIQGNKIDNDTSLETLSKIAVSQAKAGVDTVSPSAMMDGQVAAIRKAL
DDEGFSDVSIMSHSAKHRSNFYAPFRDAAECAPKFGDRKTYQVPYTNAREAMMEVETDIN
EGVDIVMIKPALSYLDLIAETRRKFNVPVAAYSVSGEYALVKAASQLGYVNEKDMTEEIL
YSIKRAGADMIVTYFAKSASKFLQES
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttccaaccagacgtctacgtagattaagaacatcaggtaaaatgagagagttg
gttcagcagaccacactttctccaaaagatttcatttgtccagtatttgttcaagaagat
ctaaagacaagaaccaaagttgaatcaatgacagcaattgaaagactaccattagaggat
gttaacgatgaagttggaaccattagtgatttaggtattcctgcaataatgttatttgga
attccaactcagaaagatgatgcaggttcttctgcatttgatgacaatgggattgtacaa
aaagcaatttctcagattcgagaaaactttggagataagatggtaattatggcagatgta
tgtttatgtcaatttacatccacaggacattgtggaattattcaaggaaataaaattgat
aacgatacaagtttagaaacactttcaaagattgcagtaagtcaagcaaaagcaggagtt
gacacagtttcaccttctgcaatgatggatggtcaagttgcagcgattagaaaagcactt
gatgatgaaggattttcagatgtctcaataatgtctcattctgcaaaacatcgttcaaac
ttttatgcaccatttagagatgcagctgaatgtgcaccaaagttcggagacagaaaaaca
taccaggttccatatacaaatgcaagagaagcaatgatggaggtagaaacagacatcaat
gaaggagtagacattgttatgataaaacctgcattatcatatttggatttaattgcagaa
acaagaagaaaattcaatgttccagttgcagcatacagtgtttctggagaatacgcgctg
gtaaaggccgcttcacagttaggatatgtcaatgaaaaagacatgacagaagaaatactg
tattcaataaagagagcgggggcagatatgatagtaacttattttgcaaaatctgcttca
aaatttcttcaagaatcatga
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