Candidatus Nitrosopumilus sp. SW: Nisw_02665
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Entry
Nisw_02665 CDS
T06175
Name
(GenBank) ribosome assembly factor SBDS
KO
K14574
ribosome maturation protein SDO1
Organism
niw
Candidatus Nitrosopumilus sp. SW
Pathway
niw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
niw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Nisw_02665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
niw03009
]
Nisw_02665
Ribosome biogenesis [BR:
niw03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
Nisw_02665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
EFG_C
Motif
Other DBs
NCBI-ProteinID:
QDI88510
LinkDB
All DBs
Position
complement(427741..428427)
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AA seq
228 aa
AA seq
DB search
MADVTVARFSFEGEKFEILVKPDLALEYKLGKKKDISAILVSEDIYTDSGKGTKPSTEKL
LKAFKTEDQTEIAQIIMQKGDLNLTTDQRRKMIEDKKKQIVAYIAKTYVDPKTHLPHPPL
RVEQAMKDGRVSVDPQKSVDEQVKDIVDKLRSIIALKSENLELEIIIPAQYASQSYAVLK
SVGSLKKEEWQNNGSLKAILEIPAAARPNVIDRLGSITKGSASVEVMQ
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgtaacagttgcaagattctcttttgaaggagagaaatttgagatattggta
aaacctgatctagcattagagtacaagcttggaaagaaaaaagatatttctgcaatttta
gtttcagaagacatctacactgattcaggaaaaggcacaaagccctcaactgaaaaatta
ctcaaagctttcaaaaccgaagatcaaactgagattgctcaaataattatgcaaaaaggt
gatcttaatcttacaactgatcaaagacgaaaaatgattgaagacaagaaaaaacagatt
gttgcatacattgcaaagacctatgtcgatcctaaaactcacttgcctcatccacctttg
agagttgagcaagcaatgaaagatggaagagtttcagttgatcctcaaaaaagtgtagat
gaacaagtaaaagatattgtagataaacttcgttcaataattgctctaaaatctgaaaac
ttggaattggagattattatccctgcacaatatgcttcacaatcatatgctgttctaaag
tctgtaggttctctaaaaaaagaagaatggcaaaataatggttctctaaaagcaatactt
gaaatacccgctgcagcaaggccaaacgtgatagacagattaggttctataaccaaaggt
tctgcttcagttgaggtaatgcaataa
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