Candidatus Nitrosopumilus sp. SW: Nisw_02890
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Entry
Nisw_02890 CDS
T06175
Name
(GenBank) transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
niw
Candidatus Nitrosopumilus sp. SW
Brite
KEGG Orthology (KO) [BR:
niw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Nisw_02890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
niw03021
]
Nisw_02890
03019 Messenger RNA biogenesis [BR:
niw03019
]
Nisw_02890
Transcription machinery [BR:
niw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
Nisw_02890
RNA polymerase I system
Nisw_02890
Messenger RNA biogenesis [BR:
niw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
Nisw_02890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
KOW4_SPT5
NAGLU_N
KOW5_SPT5
Fibroin_P25
Motif
Other DBs
NCBI-ProteinID:
QDI88554
UniProt:
A0A514L9N9
LinkDB
All DBs
Position
462775..463233
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AA seq
152 aa
AA seq
DB search
MSEEVKSHLFAIRTTGGQEKVVMRLLEAKANANQINIQSVFWVSDLKGYVVIEAINPSDA
YMAVEGVRHIRGQLRGELEFKDIEGYLVKKSTVSTLAVDNVVEITGGPFKGMKATITRID
PEKEEATVVLLDASYQLPVTVDANYLKLSTEG
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgaagaagtaaagtcacatttgtttgcaattagaaccacaggtggacaagaaaaa
gtggtaatgagattattagaagcaaaagctaatgctaatcaaatcaatattcaatcagta
ttttgggtaagtgatcttaaaggatatgttgtcattgaagcaataaatccaagtgatgca
tacatggccgtagaaggtgtaagacacatccgcggtcaattaagaggggaattagaattc
aaagatatcgaaggatatttggtgaagaaatcaacagtttcaacattagcagtagacaac
gtagtagagattactggaggaccattcaaaggaatgaaagcaacaattaccagaatcgac
ccagaaaaagaagaagccacagttgttttgcttgatgcatcatatcaattaccagttaca
gtcgacgcaaactatctaaaactatcaactgagggttag
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