Candidatus Nitrosopumilus sp. SW: Nisw_03445
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Entry
Nisw_03445 CDS
T06175
Name
(GenBank) ribosome biogenesis/translation initiation ATPase RLI
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
niw
Candidatus Nitrosopumilus sp. SW
Brite
KEGG Orthology (KO) [BR:
niw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
niw03009
]
Nisw_03445
Ribosome biogenesis [BR:
niw03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
Nisw_03445
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
Fer4
SMC_N
Fer4_6
Fer4_21
Fer4_7
Fer4_2
Fer4_10
RsgA_GTPase
Fer4_9
Fer4_3
Fer4_16
Fer4_4
MMR_HSR1
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QDI88650
UniProt:
A0A514L9W7
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All DBs
Position
558480..560267
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AA seq
595 aa
AA seq
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MTHRVGVLDHELCQPKKCGLECIKYCPVNKSGADCIVLNEESKKAQIDEDICNGCGICVK
VCPFDAITIVNLASELATDKIHQYGPNSFRLYKLPTPKKGEVVGLLGRNGMGKSTVVNIL
SGNLKPNLGRYEDPPEWDEILKYYSGTELKQHFDKIKQNQIRASIKPQQVHHIAQAFDGT
GKELIEKYDERGVSRELIKELGLQNSVDQSLKELSGGELQRIAVAAAASKDTEFYFFDEP
SSYNDVFQRTGVARVIQSLAKIGKSVMVVEHDLTLLDFLSDYIEVLYGEPSAYGIVSNIL
STKVGINVFLDGYLPNENVRFRDKAFSFDVSSTSTDEFQEGSEIVSYPKLIRKYPSFSVE
IEPGRVRKGEVLGIMGANALGKTTMMKMIAGVEKPDSGEIDKKIKIAYKPQYLQNDIDVE
VVALLDKANGSPVEGSLEEEQILDPLKIKKLYNKSVKNLSGGELQKVAVASCLLQKVDLY
ALDEPSAFLDVEDRIAVAKFLQKFVRSFGKSAIVIDHDLQLMDLISDTMVIFEGESGAAG
KATSPLPKADAMNKFLRSLDMSFRRDEKSLRPRVNKLESRLDKDQKSSGNFYYKN
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatagagtcggagttttagatcatgagctctgtcagcctaaaaaatgcggttta
gagtgcataaagtactgtccagttaacaaatcaggcgcagattgtattgtactcaatgag
gaatcaaaaaaggcccagattgatgaggatatttgtaatgggtgtggaatatgtgtcaag
gtatgtccatttgatgcaattacaatagtaaatttagcaagcgagttagctactgataaa
attcaccaatatggtccaaattcatttcgattatacaaattgccaactccaaagaaagga
gaggtagtaggtttacttggaagaaacggtatggggaaaagtactgttgtaaacattcta
tcaggaaatctaaaaccaaatcttggaagatatgaagaccctcctgaatgggacgagatt
ttaaaatattatagtggaacggaattaaaacaacattttgataaaattaaacaaaatcaa
atacgtgcatcaattaaaccacaacaagtacaccatatcgcacaagcatttgatggaact
ggaaaagagcttattgaaaaatatgatgagagaggagtatctagagagttgatcaaagaa
ttaggattacaaaattctgttgatcaaagcttaaaggaattaagtggtggagaattacaa
agaattgcagtagctgctgcagcttctaaggatacagaattttacttttttgacgaacca
tcatcttacaatgatgtttttcaaagaacaggtgttgcacgagtaattcaaagtcttgca
aaaattgggaaaagcgtaatggttgtagaacacgacttgacattacttgattttcttagt
gattatatcgaagtactttatggggaaccatcagcttatggtattgtatcaaatattctt
tcaaccaaagtcggaatcaatgttttccttgatggatatctaccaaatgaaaatgtaaga
tttagagataaagcattttcatttgatgtttcatctacatctacagatgaatttcaagaa
ggaagtgaaattgtaagctatccaaaattaataagaaaatacccttcattttcagttgaa
atcgagcctggtcgggtaaggaaaggagaggtcttgggaattatgggagcaaatgcactt
ggaaagaccactatgatgaagatgattgcaggtgttgaaaaaccagattccggtgaaatt
gataaaaaaattaagatagcatacaaaccacaatatcttcaaaatgatattgatgtagaa
gttgttgcattacttgacaaagcaaatggaagtccagttgaaggaagtcttgaagaagaa
cagattcttgatccattaaagatcaagaaactctacaacaaatcagtaaagaatctctca
ggaggagaactacaaaaagtagcagtggcatcatgtcttttgcaaaaagtagatttgtat
gcacttgatgaaccatcagcatttttagatgttgaagatagaattgctgttgcaaaattt
ttacagaaatttgttcgctcttttggaaagtcagcgattgtaattgatcatgatttacag
ttaatggatttaatttcagataccatggtaatctttgaaggagaatcaggagctgcagga
aaagctacatcaccattaccaaaagcagatgcaatgaataaattcctaagatcattggac
atgtcatttagacgagatgaaaagagtcttagaccaagagtaaacaaattagaaagcaga
ttagataaagaccagaaatcatctgggaatttctattacaagaattga
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