Candidatus Nitrosopumilus sp. SW: Nisw_03565
Help
Entry
Nisw_03565 CDS
T06175
Name
(GenBank) acetyl-CoA carboxylase biotin carboxylase subunit
KO
K18603
acetyl-CoA/propionyl-CoA carboxylase [EC:
6.4.1.2
6.4.1.3
]
Organism
niw
Candidatus Nitrosopumilus sp. SW
Pathway
niw00720
Other carbon fixation pathways
niw01100
Metabolic pathways
niw01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
niw00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
Nisw_03565
Enzymes [BR:
niw01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
Nisw_03565
6.4.1.3 propionyl-CoA carboxylase
Nisw_03565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
RimK
ATP-grasp_4
ATP-grasp_5
GARS_A
ATPgrasp_ST
SHPRH_helical-1st
LpxI_N
ShK
DUF3182
Motif
Other DBs
NCBI-ProteinID:
QDI88671
UniProt:
A0A514LBT1
LinkDB
All DBs
Position
complement(578195..579682)
Genome browser
AA seq
495 aa
AA seq
DB search
MIKKVLIANRGEIALRVIRTCNALGIKTVAVYSDEDYNSLHVKKADESYHIGEAAPAKSY
LNQEKILEVMLSSGADAVHPGYGFLSENDDFARLCEKNKITFIGPSADSMNLCGDKMECK
AAMLKAKVPTVPGSPGLVSDANEAEKIANEIGYPVLLKSVYGGGGRGIRLVTNDKELREG
FETVTSESISAVGKSAIIVEKFLEKTRHIEYQMCRDHHGNAVHLFERECSIQRRNQKLIE
QTPSPVVDDAKREEIGELVVKAAEAVDYTNLGTAEFLRADNGEFYFIEINARLQVEHPIS
EMVSGLDFVKLQIDIANGEPLPFKQKDLKMNGYAIECRINAEDTFLDFAPSTGPVPDVTI
PAGPNVRCDTYLYPGCTVSPFYDSLMAKLCTWGPTFEESRTRMLTALNDMYVQGVETSIP
LYKTILNSEEYKKGELSTDFLKRYGMIDKLTEDLKKEKENKSEAALAAAIIHSEYFKNRV
QNNSTTSATWKNKLD
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgattaagaaagtactaattgctaacagaggagaaattgctcttagagtaatcagaaca
tgtaatgcattaggcataaagactgttgcagtatattctgatgaagattacaattcttta
catgtaaagaaagctgatgaatcctatcatattggagaagcagctcctgcaaaatcatat
cttaatcaagaaaaaatccttgaagtgatgttgtcttcaggtgcagatgctgtacatcct
ggttatggattcctttctgaaaatgatgacttcgcaagattatgtgaaaaaaataaaatt
actttcattggaccatctgctgattccatgaacctatgtggtgataagatggaatgcaaa
gctgcaatgctaaaagctaaagttccaacagtacctggaagtccaggattagtatctgat
gcaaatgaagcagaaaaaattgcaaacgaaattggataccctgtacttttgaaatcagtt
tatggtggtggaggtcgtggaattagattagttactaatgataaagaattacgtgaaggt
tttgaaacagtaacctccgaatctatttcagcagttggaaaatctgcaattattgttgaa
aaattcctagaaaaaaccagacacattgaataccagatgtgtagagatcatcatggtaat
gcagtacatctctttgaaagagaatgttctattcaaagaagaaatcaaaaactaattgaa
caaaccccttctcctgttgtagatgatgcaaaaagagaagaaattggtgaattagttgtt
aaagcagcagaagctgttgattacactaatcttggtacagcagaatttctaagagctgat
aatggtgaattttattttattgagattaacgcaagacttcaagtagaacatcctatcagc
gaaatggtttcaggattagactttgttaaactgcaaattgatattgcaaatggagaacca
cttccattcaaacaaaaagatctgaagatgaatggttatgctattgaatgtagaattaat
gctgaagatacatttttggactttgcaccttcaactggtcctgttccagatgtaacaatt
cctgcaggacctaatgttagatgtgatacctatctttatcctggatgtacagtatctcca
ttttatgattcattaatggcaaagctttgtacttggggaccaacatttgaagaatctaga
actagaatgcttactgcattaaatgatatgtatgttcaaggtgtagaaacatcaattcca
ctatacaaaacaattctaaattctgaagaatacaaaaaaggagaactatccactgacttt
ttgaaacgttatggtatgattgataaattaactgaagatcttaagaaagaaaaagaaaac
aagagcgaagcagctttagctgcagctatcattcattctgaatactttaagaacagagtt
caaaacaatagcacaaccagcgcaacttggaaaaataaattggattga
DBGET
integrated database retrieval system
