Candidatus Nitrosopumilus sp. SW: Nisw_04425
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Entry
Nisw_04425 CDS
T06175
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
niw
Candidatus Nitrosopumilus sp. SW
Pathway
niw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
niw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Nisw_04425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
niw03019
]
Nisw_04425
03009 Ribosome biogenesis [BR:
niw03009
]
Nisw_04425
04131 Membrane trafficking [BR:
niw04131
]
Nisw_04425
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
niw04147
]
Nisw_04425
Messenger RNA biogenesis [BR:
niw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Nisw_04425
Ribosome biogenesis [BR:
niw03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Nisw_04425
Membrane trafficking [BR:
niw04131
]
SNARE
SNARE associated proteins
Others
Nisw_04425
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Nisw_04425
Exosome [BR:
niw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Nisw_04425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
AAA_16
RuvB_N
AAA_2
CDC48_2
AAA_14
TIP49
AAA_22
AAA_5
AAA_33
nSTAND_NTPase5
AAA_28
Sigma54_activat
RNA_helicase
nSTAND3
IstB_IS21
AAA_7
ATPase
NPHP3_N
Mg_chelatase
AAA_lid_PRS2_C
TsaE
ABC_tran
Bac_DnaA
NB-ARC
AAA_24
NACHT
PhoH
ATPase_2
DUF815
AAA_18
Parvo_NS1
ATP-synt_ab
AAA_30
Cytidylate_kin
Zeta_toxin
AAA_3
AAA_17
DUF5906
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QDI88818
LinkDB
All DBs
Position
716151..718319
Genome browser
AA seq
722 aa
AA seq
DB search
MSQNALSLKVLEAYTRDVGRGVARIDYDSMDTLNASTGDVIEIKGKRRTVAKCLPLYPSD
EGKGIIRIDGLGRNNSGIAIGDTISVRKIKAVAAEKVVVAPLEAIPPIDERYLADALESV
PLIKGDNVMVPYFGGRLTFQVIGVTPAADAVLITQKTVFHIAEKGETLRGVPQVTYEDIG
GLTDEIKKVREMIELPLRHPEIFEKLGIEAPKGVLLYGPPGTGKTLLAKAVANESNAHFI
SISGPEIMSKFYGESEARLREIFKEAREKAPSIIFVDEIDSIAPKREEVTGEVERRVVSQ
MLSLMDGLEARGKVIVISATNRPNAIDPALRRPGRFDREIEIKVPDKKGRKDILAIHSRN
MPLSDDVNIDKISSVSHGYVGADLEYLCKEAAMKCLRRLLPILNLEEEKIPPETLDKLIV
NHEDFTKALIEVTPSGMREVFIENPDVKWDEVGGLEDVKRELQEAVEWPMKYPGLYDKLG
HSMPRGILLHGPSGTGKTLLAKAVATQSEANFVSVRGPELLSKWVGESERGIREIFKRAR
QSAPCVVFFDEIDSIAPIRGAGGETAVTERVVSQLLTELDGMENMHGVVVLAATNRADMI
DPALLRPGRFDKIIQVPNPDKDSRKRILEINAEKIPMGDDVDLDKIAEATDGMSGADTSS
IANTAVSLVIHEYLDKHPDVKDVEKSSIDAKVTMKHFEEAVKKVREQKDLKMGEKLVASY
YR
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaaatgctctttctctcaaagttctagaggcatatactagagatgttggaaga
ggagtagcaagaattgattatgattcaatggacacattaaatgcatcaacaggtgatgtt
atagaaattaagggtaaaagacgaacagttgcaaaatgtcttccattatatccatctgat
gaaggaaagggaattatcagaattgatgggctaggaagaaataattcaggaattgcaatt
ggagatacaatttcagtaagaaaaatcaaagcagttgctgcagaaaaggttgtagttgct
ccattagaagcaattcctccaattgatgaaagatatcttgcagatgctttagaaagtgtt
cctttgataaaaggagataatgttatggttccatactttgggggacgtttaactttccaa
gtaattggcgttaccccagctgctgatgcagttttgattactcaaaaaacagttttccat
attgcagaaaaaggagagacattacgtggagttccacaagtaacctatgaagacattgga
ggtttaactgatgaaataaagaaagtaagagaaatgattgaacttccattaagacatcct
gaaatttttgaaaaattaggaattgaagctccaaagggtgttttattgtatggtccaccg
ggaacaggtaaaacattgcttgcaaaagctgttgcaaatgaaagtaatgcacattttatc
agcatttcaggtccagaaattatgagtaagttttatggtgaaagtgaagctaggttaaga
gaaattttcaaagaagcaagagaaaaagctccttcaattatcttcgttgatgaaattgat
tctattgcaccaaaaagagaagaagttactggagaagttgaaagaagagttgtatctcaa
atgttatcattaatggacggattagaagccagaggcaaagtaattgtaatttctgcaaca
aacagaccaaacgcaatcgatcctgctcttagacgacctggtagatttgatagagaaatt
gaaatcaaagtgccagataaaaaaggaagaaaagacattcttgcaattcacagtagaaac
atgccgttatcagatgatgtcaacatagataaaatttcatcagttagtcacggatatgtc
ggtgcagatttggaatatctatgtaaagaagcagcaatgaaatgtttgagaagattatta
cccattctaaatcttgaagaagaaaagattccacctgagacattagataaattaattgta
aatcatgaagactttaccaaagctttgattgaggtaacaccatctggaatgagagaagta
ttcattgaaaatccagatgtgaaatgggatgaagttggtggtttagaagatgttaaacga
gaattacaagaagcagttgaatggccaatgaaatatccaggtctttatgataaattagga
cacagtatgcctagaggaatattacttcacggtccaagtggtacaggtaaaacattgctt
gcaaaagctgttgcaacacaaagcgaagcaaactttgtttctgttagaggtcctgaatta
ttatctaaatgggtaggggaatcagaaagaggaattagagaaattttcaaaagagcaaga
cagtctgcaccatgtgtagttttctttgacgaaatagactctatcgcaccaattagagga
gcaggtggtgaaactgcagtaactgaaagagttgtcagtcaattacttacagagttagat
ggaatggagaatatgcatggagttgttgttttagctgcaacaaacagagcagatatgatt
gatccagcattattgagaccaggcagatttgataaaattattcaagtaccaaatccagat
aaagatagtagaaagcgtattctggaaattaatgccgaaaagattcctatgggagatgac
gtagatttagataagattgcagaagctacagatggaatgagtggagctgatacttcatct
attgcaaatacagcagtttcattagttattcatgaatatctagacaaacacccagatgtc
aaagatgttgaaaaaagtagtattgatgccaaagttaccatgaaacactttgaagaagca
gtaaagaaagtaagagaacaaaaagacctcaagatgggcgaaaaactggtagcatcttac
tacagatag
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