Candidatus Nitrosopumilus sp. SW: Nisw_04630
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Entry
Nisw_04630 CDS
T06175
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
niw
Candidatus Nitrosopumilus sp. SW
Pathway
niw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
niw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Nisw_04630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
niw03400
]
Nisw_04630
Enzymes [BR:
niw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Nisw_04630
DNA repair and recombination proteins [BR:
niw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Nisw_04630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QDI88854
UniProt:
A0A514LAH3
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All DBs
Position
758375..759214
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AA seq
279 aa
AA seq
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MQIGCHVSISGSIDKAVDNAVERECSAFQIFTRNPRGWHAKPLTKEDITNFKSKLKESKI
DRFATCAHMPYLPNLATPKEDGFEKSVKTLVDEVERCAQLGIPYLVTHLGSHLGTGEESG
IKRLVKGLTQAGKTKNDVMILLENTAGQKNSVGSDFKQLGEIFKQLKPTKKFGVCLDSCH
AFVSGYDLRTEKTVKETFAEFDKYVGIDNLKILHLNDAKGEIGCNLDRHYHLGMGGIGEE
GISAIVKYANKKKIPIVLETPIDDDRDDFENIRKAKEFA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcagattggttgtcatgtatcaatttcaggttccattgacaaggcagtagataatgca
gttgagagagaatgttcagcatttcaaatttttactagaaatccaagaggatggcatgca
aagccacttacaaaagaagacattactaattttaaatcaaaattaaaagaaagtaaaatt
gatagatttgcaacctgtgcacacatgccatatcttccaaatttagctactcccaaagaa
gacggatttgaaaaatcagtaaaaactttggttgatgaagttgagagatgtgcacagtta
ggaattccatatcttgtaacccatttgggaagccatttaggaactggtgaagaatctgga
attaagagattagtcaaagggttaacccaagcaggtaaaacaaaaaatgatgtaatgatt
ctattagaaaatacagcaggacaaaaaaattctgtgggttcagattttaaacaactagga
gaaatattcaagcagttaaaacctacaaaaaaatttggtgtttgtttagattcatgccat
gcatttgtttcaggatacgatttgaggactgaaaaaacagtgaaagaaacttttgctgaa
tttgataaatatgtaggaatagataacttgaaaattcttcatctaaatgatgccaaaggt
gaaattggatgtaatcttgatagacattatcatttaggaatgggagggattggagaagaa
ggaatttctgctattgtaaagtatgcaaataaaaagaaaataccaatagttttagagaca
cctattgatgatgacagagatgactttgagaacattagaaaagcaaaagaatttgcgtag
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