Candidatus Nitrosopumilus sp. SW: Nisw_04635
Help
Entry
Nisw_04635 CDS
T06175
Symbol
glyS
Name
(GenBank) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
niw
Candidatus Nitrosopumilus sp. SW
Pathway
niw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
niw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Nisw_04635 (glyS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
niw01007
]
Nisw_04635 (glyS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
niw03016
]
Nisw_04635 (glyS)
03029 Mitochondrial biogenesis [BR:
niw03029
]
Nisw_04635 (glyS)
Enzymes [BR:
niw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
Nisw_04635 (glyS)
Amino acid related enzymes [BR:
niw01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Nisw_04635 (glyS)
Transfer RNA biogenesis [BR:
niw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Nisw_04635 (glyS)
Mitochondrial biogenesis [BR:
niw03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Nisw_04635 (glyS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
Rad50_zn_hook
Thr_dehydrat_C
zinc_ribbon_15
Motif
Other DBs
NCBI-ProteinID:
QDI88855
UniProt:
A0A514LB99
LinkDB
All DBs
Position
759245..760702
Genome browser
AA seq
485 aa
AA seq
DB search
MDYETVMKLALERGFYFPSCEVYADAQAGFWEYGPTGVGLKNKFLELWRRELIRRDGMLE
IDGSQIMSKSVFEASGHLGNFADPIIKCTKCNSTFRADRTIAELTQIEIPESADLEEFDN
AINQNNIKCPKCKGEFDKTKNFNMMFKVGIGPEEEEAYLRPETCQSIFVDFPRLYKTMRG
KLPLGIAQVGKSFRNEIAPRQSLLRLREFYQAEIEVFCNPSKLDEMEKFVEIQDTVIRVQ
TDAEPISMTCKEAIESGTVPNKFVAYYLGILTEFYEKTGIDISKSRFRKLGDKEKAFYAE
VAFDFEVETTIGWLELVACNYRSDYDLSSHANKSKEKFEVMDNDDKVLPHVFEISMGIDR
SLYTILEHSLKDDKEHERVVLSLKPYLSPIHVGILSLVKKDGLKEKTDEIYLSIKRKFDA
FLDHSGAIGRRYRRLDEIGAPFAVTVDHQTLEDDTVTIRKRDSMEQTRIKISEIDPILLE
SVAFP
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggactatgaaacagtaatgaaattagcacttgagcgtggattttactttccaagttgt
gaggtttatgcagatgctcaagctggtttttgggaatatggtccaacaggggtgggttta
aaaaataaatttttagaattatggagaagagaattaatcagaagagatggaatgctagag
attgatggttctcaaataatgtcaaaatcagtgtttgaagcatcagggcatttaggaaat
tttgcagatccaattataaaatgtacaaaatgtaactcaacatttagagctgatagaaca
attgcagagttaacacaaattgaaattcccgaaagtgcagatttggaggaatttgataat
gcaattaatcaaaataacataaagtgtccaaagtgtaaaggagaatttgataaaacaaag
aatttcaatatgatgtttaaagtaggaattggtcctgaagaagaagaggcatatcttaga
ccagagacatgtcaatcaatctttgttgattttcctagattatacaaaactatgaggggg
aaacttcctttagggattgctcaggttggaaaaagttttagaaacgaaattgcgccaaga
caaagtctcttacgtttaagagaattttatcaggcagaaattgaagtattttgtaaccca
tcaaaactagatgagatggaaaaatttgtagagattcaagatacggtaatcagagtacaa
acagacgctgagccaatttcaatgacatgtaaggaagcaatagaatcaggaacagtcccg
aacaagtttgttgcatattatttaggaatactgactgagttttatgagaaaacaggaata
gatatctcaaagagcagatttagaaagttaggagacaaggaaaaagcattctatgcagaa
gttgcatttgattttgaagtagaaacgacaatcggatggttagaactggttgcatgtaat
tacagatcagactatgacttgtccagtcatgcaaacaagagtaaagagaaatttgaagtg
atggataatgatgataaagtcttaccacatgtttttgagatttcaatgggaattgataga
agtctatacacaattttagagcattcattaaaagatgataaagaacatgaaagagttgta
ttatcattaaaaccatatctctcacctattcatgtagggattttatccttagtaaaaaaa
gacgggttgaaagaaaaaacagatgagatttatctttccataaaaagaaaatttgatgca
tttttagatcattctggtgcaatcggtagaagatatagaagattagatgaaattggagct
ccgtttgcagttacagttgatcatcaaacattagaagatgacaccgttactataagaaaa
agagattctatggaacagacaagaataaaaatttcagaaattgatccaattcttttagaa
tcagttgcattcccatag
DBGET
integrated database retrieval system
