Candidatus Nitrosopumilus sp. SW: Nisw_04940
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Entry
Nisw_04940 CDS
T06175
Name
(GenBank) transcription initiation factor TFIIIB
KO
K03124
transcription initiation factor TFIIB
Organism
niw
Candidatus Nitrosopumilus sp. SW
Pathway
niw03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
niw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Nisw_04940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
niw03021
]
Nisw_04940
Transcription machinery [BR:
niw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Nisw_04940
Prokaryotic type
Archaeal type
TFB
Nisw_04940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
QueH
DUF7078
Motif
Other DBs
NCBI-ProteinID:
QDI88913
UniProt:
A0A514LAN0
LinkDB
All DBs
Position
814117..815037
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AA seq
306 aa
AA seq
DB search
MVENYSNDYDVKCELDACKTYPAITDSERGEIVCGGCGLILVQNLADASYENNGYTQEDF
MKQARTGPATSLTMFDKGLSTVIGNNKDSSGNALSSKTKYEFNRLRTWDQRSKSRKTATL
SKAFTLLHSMKTKLGVPDNVVENAAYIYRKTVSAKLTRGRTMASLISASLYAACRENNIP
RTLDDIAEAGNVERRILSRDLRTIIRKLELNLNQYDTSSFISKISNNMNLKEKTKRGAFE
ILKRCEEEEITAGKHPVAQAAASLYISCIINGEKVSQKKFSVEAGVSDVTIRNRTALIKK
ILKLDE
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtggtagaaaattattcaaacgattatgatgtcaagtgtgaactagatgcttgcaaaacc
taccctgcaataacagattctgaacgaggagaaattgtttgtgggggttgcggtcttatt
ctagtgcaaaacttagctgacgcatcatatgaaaacaatggttacactcaggaagacttt
atgaagcaagcaagaacaggtcctgcaacatcgctaacgatgtttgataaaggattatca
actgttattggaaacaataaagattcttcaggaaatgcattatccagtaaaacaaaatat
gaattcaatagactcagaacatgggatcaaagaagtaaatcaagaaaaactgctactttg
agtaaggcctttactttacttcattcaatgaagacaaagttaggagtaccagataatgtg
gtagaaaatgctgcctatatctacagaaaaactgttagtgcaaaattaacacgaggaaga
acaatggcatcattgatctcagcctcattatatgcagcatgtagagaaaacaacatccca
agaacattagacgatattgccgaagctggtaatgtggaaagaagaatactttcccgagat
ttgagaaccataatcagaaagcttgaattgaatcttaatcagtatgatacttcctcgttt
atctcaaagatttcaaacaacatgaatttgaaagaaaaaacaaagcgtggagcatttgag
atactaaagcgctgtgaagaagaagaaattactgctggaaaacacccagtagcacaagca
gctgcttcgttatacatttcatgtataattaatggagaaaaagttagtcaaaagaaattc
tcagtagaagcaggagtaagtgatgtaacaattcgaaacagaactgctttgattaagaaa
atactaaagcttgatgagtag
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