Candidatus Nitrosopumilus sp. SW: Nisw_04955
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Entry
Nisw_04955 CDS
T06175
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
niw
Candidatus Nitrosopumilus sp. SW
Pathway
niw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
niw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Nisw_04955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
niw03019
]
Nisw_04955
03009 Ribosome biogenesis [BR:
niw03009
]
Nisw_04955
04131 Membrane trafficking [BR:
niw04131
]
Nisw_04955
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
niw04147
]
Nisw_04955
Messenger RNA biogenesis [BR:
niw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Nisw_04955
Ribosome biogenesis [BR:
niw03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Nisw_04955
Membrane trafficking [BR:
niw04131
]
SNARE
SNARE associated proteins
Others
Nisw_04955
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Nisw_04955
Exosome [BR:
niw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Nisw_04955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_2
AAA_5
CDC48_2
TIP49
AAA_14
AAA_22
AAA_lid_PRS2_C
AAA_33
nSTAND3
RNA_helicase
Mg_chelatase
AAA_28
IstB_IS21
NPHP3_N
ABC_tran
AAA_18
AAA_7
Zeta_toxin
AAA_24
DUF5906
Sigma54_activat
AAA_3
Parvo_NS1
AAA_11
DUF815
AAA_17
TsaE
AAA_30
bpMoxR
AAA_19
PhoH
SLFN-g3_helicase
ResIII
Vps4_C
Viral_helicase1
ATPase
Motif
Other DBs
NCBI-ProteinID:
QDI88916
UniProt:
A0A514LAN2
LinkDB
All DBs
Position
complement(815808..817949)
Genome browser
AA seq
713 aa
AA seq
DB search
MSEIILKVDEIPQQHVGRGRAIIDPKIIEDQKWNTGQILELTYNKKTHVKLWPGNPEEYG
TGIIKIDGMTRQNIGAGIGDKISLKSVEASNAEQIVLSPTEKISAEGLQEYMIYNYLNHV
FTTGDTLSLNTQMGGRVQFIVTSTKPSKPVIVTENTVFKLGTMTKSVDASVPRITYDELG
GLKNEVQKIREMVELPMRHPELFDKIGVEAPKGVLLYGPPGTGKTLLAKAVAGETNAHFI
SLSGPEIMGKYYGESEEKIREIFNQAEENSPSIVFIDEIDSIAPKRDEVSGEVEKRIVSQ
LLTLMDGMKSRGKVVVIAATNRPDSIDPALRRPGRFDREIEIGIPDDEGRFEILSIHTRG
MPIDEKVDLKQISKTTHGFVGADLEVLSKEAAMRSLRRILPEIDLDEDKISSEILQKIEI
TSEDFRDALKEVRPSALREVQVQIPNVSWDDVGGLDELKEELREAVEWPIKHKEAFDYVD
VETPKGILLHGPPGTGKTLIAKALAKMTESNFISIKGPELLSKWVGESEKGVREIFRKAR
QAAPCIIFLDEVDALVPRRGSGGSESHVTESVVSQILTEIDGLEELHNVLIVGATNRLDI
VDDALLRPGRFDRIIEVPNPDAKGRKNIFEIHTKKKPLASDVDIAKLVELTDGFSGAEIA
AVANRAAVAALKKYVGGKTQNIKDIKISQQELIDAIDKVKPQKKEAPLAQSIK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaattattttaaaagttgatgaaattccgcaacaacatgttggacgaggaaga
gcaataattgatccaaaaattattgaagatcaaaaatggaatactggccaaatcttagaa
ttaacatataacaaaaaaacacatgtaaaactttggccaggtaatcctgaagaatatgga
acaggaattatcaaaattgatggaatgacaagacaaaatattggagcaggaattggtgat
aagatttctctaaaatcagttgaagcttccaatgctgaacaaattgtcttgtctcctact
gagaaaatatctgctgaaggcttacaagaatacatgatttacaattatcttaatcatgta
tttacaactggagatacattatctcttaatactcaaatgggtggaagagttcaattcatt
gtaactagtactaaaccatcaaaaccagttatagttactgaaaatacagttttcaaactt
ggcacaatgacaaaatcagttgatgcatctgttccaagaataacctatgacgagttaggt
ggcctcaaaaacgaagtccaaaaaattcgtgagatggttgaattaccaatgagacatcca
gaattgtttgataaaataggtgtggaagctccaaaaggcgtcttattgtatggtcctcca
ggaacaggaaagactttacttgctaaggcagtagctggtgaaaccaatgctcactttatc
tcacttagtggccctgaaatcatgggaaaatactatggcgaaagtgaagagaaaatacga
gaaattttcaatcaagctgaagaaaattctcctagtatagtcttcattgatgaaattgat
tctattgctccaaaaagagacgaagtttcaggcgaagttgaaaagagaatagtttctcaa
cttttgactttgatggatggaatgaaatctagaggcaaagttgtagtaattgcagctacc
aatagaccagattctattgatcctgctcttagacgacctggtagattcgatagagagatt
gaaattggaattcctgatgatgaaggaagatttgaaattctttcaatccatacacgtgga
atgccaatagatgaaaaagtagatcttaaacaaatctcaaagacaacccatggatttgtc
ggagctgacttggaagtcctatcaaaagaagctgcaatgagatcactccgcagaattctt
cctgagatagatcttgatgaagataagatatcatcagaaattcttcaaaaaatagagatt
acaagtgaagactttagagatgcactaaaagaagtcagaccaagtgcattgcgtgaagtt
caagtacagattcctaatgtaagttgggatgatgttggtggtcttgatgaactaaaagaa
gaattacgcgaagcagttgaatggcccatcaaacacaaagaagcatttgattatgttgat
gttgaaacgccaaaaggaatcttacttcatggcccgccaggaactggcaaaacattgatt
gcaaaagcactcgcaaaaatgacagaatcaaactttatcagcataaagggaccagaacta
ctctcaaaatgggttggtgaatctgaaaaaggagtcagagaaatcttcagaaaggcaaga
caagcagcaccatgtatcatctttttagatgaagtagatgcacttgtgcctagaagaggt
agtggaggctcagaatcccatgtcacagaaagtgtagtgtctcaaatactaactgagatt
gatggattagaagaactacataatgtgttgatagttggtgcaacaaaccgactagatatt
gtagatgatgcattacttagacctggaagatttgacagaattattgaagttccaaatcca
gatgcaaaaggaagaaaaaacatctttgagattcataccaaaaagaagccacttgcaagt
gatgtagatattgcaaaacttgtagaattaactgatggattcagtggagcagaaattgca
gcagttgcaaacagagcagcagttgcagctctcaaaaaatatgttggtggtaaaacacaa
aatatcaaagacatcaagatatctcaacaagaactaattgacgcaattgacaaggtaaag
cctcagaaaaaagaggcaccacttgctcaatccataaaatag
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