Candidatus Nitrosopumilus sp. SW: Nisw_05395
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Entry
Nisw_05395 CDS
T06175
Name
(GenBank) beta-CASP ribonuclease aCPSF1
KO
K07041
uncharacterized protein
Organism
niw
Candidatus Nitrosopumilus sp. SW
Brite
KEGG Orthology (KO) [BR:
niw00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
Nisw_05395
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-Casp
KH_TffA
RMMBL
Lactamase_B
Lactamase_B_6
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QDI88998
UniProt:
A0A514LAV8
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Position
890261..892201
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AA seq
646 aa
AA seq
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MQRKQQQKELPPSSQNIMATILQSIPKEANVTKIEYEGPRIALYTNSPRYLMENNETISN
LVSVIKKRIVVRTDESIRKPEDDARKIIASLVPDDAKLQNTLFDTATGEVSIEAKRPWLL
QRNAKEFNHAEVTEKTGWKIRVRKATTVPSRTIQTINATLKQASAERSKQLKQVGDEIFR
PRLTQRTEVSLYTLGGFGQVGRSSLLLSTPESKILIDCGINPGARSPMDAFPRLDSLNIT
LDDLDAIVIGHAHLDHTGFLPTLCKYGYKGPIYCTEPTLPMMNLIQLDAIKVAAAQGRTP
IYSERDVKQIMRQTITLPYGTVTDISPDIKLVLANAGHILGSALCHFHIGNGDHNFVYSG
DIKFGKSILFEAASWNFPRVETLLIESTYGLKEDIQPSRQEVESAFINAVNNTLADGGKV
LIPIPAVGRAQEIMMVIDHYMKSGEMIEAPVFTEGMISEASAIHESYPEYLARELKQKIL
ETDDNPFDSEYFTNIEHADAREEPMREDSPCIILATSGMLEGGPVLEYFKNIAPDKKSKV
LFVSYQVNGTLGRRVLDGSKQATMLGKEGKVEVVTINCGVEKLDGFSGHSDYNQLMSFVQ
RLRPKLRRVLVNHGERKKSENLAMNIRRMHRVPAHYPQIQEAIKLF
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagaaaacaacaacaaaaagaattacctcctagtagccagaatataatggccacc
atactgcaaagtatacctaaagaagctaatgttacaaaaattgaatatgagggaccacgt
attgcactttatacaaattctcctcgatatttgatggaaaataatgaaacaatttcaaac
cttgtaagtgtaatcaaaaaacgaattgtagttagaactgatgaatcaattagaaagcct
gaagatgatgccagaaaaattattgcaagtttggttccagatgatgctaaattacaaaat
actctatttgatactgcaactggtgaagtttcaattgaagcaaaacgaccttggttgtta
caaagaaatgcaaaagaattcaatcatgctgaagtaactgagaaaacaggctggaaaata
cgtgtaagaaaggctacaaccgttccatctcgtacaattcaaaccattaatgcaactctc
aaacaagcttctgctgaaagaagtaaacaactaaaacaagttggcgatgaaattttcaga
cctagattaactcaaagaacagaagtttcactttatactcttggtggatttggtcaagtt
ggacgttcctcattattgctctctacacctgaaagtaagatactcattgattgtggaata
aatcctggtgcacgttctccaatggatgcatttcctagattggactctttgaatatcaca
ctagatgatcttgatgctatagttattggccatgcacacttggatcatactggattctta
cctacattgtgtaaatatggatacaaaggaccaatctattgtactgagccgacattacca
atgatgaatctaatccaattagatgcaatcaaagttgcagcagctcaaggaagaactcca
atctattctgaacgtgatgtaaaacaaatcatgcgacaaacaattactttaccatatgga
accgtaactgatatctctcctgacattaaactagtccttgcaaatgcaggtcatattcta
ggttctgcattatgtcactttcatattggaaatggcgatcacaactttgtttattctggt
gatattaaatttggaaaaagtattttgtttgaagctgccagttggaatttcccaagagta
gaaacattactaatagaaagtacgtatggccttaaagaagacattcaacccagtagacaa
gaagttgagtctgctttcattaatgctgtaaacaatacccttgcagatggtggtaaagtt
ctaattcctattcctgcagttggccgtgcacaagaaattatgatggtaattgatcattat
atgaaatctggtgaaatgattgaggctccagtatttactgagggaatgatttcagaagca
tcagcaatccatgaatcataccctgaatatcttgcacgtgaactaaaacaaaaaattctg
gaaacagatgataatccatttgattctgaatatttcacaaacattgagcatgcagatgct
agagaagaacctatgagagaagattctccttgtataattttagcaacatctggaatgttg
gaaggtggacctgttttagaatatttcaaaaatattgctcctgacaaaaagagcaaagtt
ctctttgtatcctatcaggtaaacggaactctgggaagaagagttcttgatggatcaaaa
caggcaaccatgttgggaaaggaaggtaaagttgaagttgtcacaattaactgtggtgta
gaaaaactagatggatttagtggacatagtgattataatcaactaatgtcctttgtacaa
agactaagaccaaaactgcgaagagtactagttaatcacggtgaaagaaagaaatccgaa
aatcttgccatgaatattagaagaatgcacagagtccctgctcattatcctcaaattcaa
gaagcaataaaattattttag
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