KEGG   Candidatus Nitrosopumilus sp. SW: Nisw_06070
Entry
Nisw_06070        CDS       T06175                                 
Name
(GenBank) RNA-binding protein
  KO
K07573  exosome complex component CSL4
Organism
niw  Candidatus Nitrosopumilus sp. SW
Pathway
niw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:niw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Nisw_06070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:niw03019]
    Nisw_06070
Messenger RNA biogenesis [BR:niw03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     Nisw_06070
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     Nisw_06070
SSDB
Motif
Pfam: ECR1_N RRP4_S1
Other DBs
NCBI-ProteinID: QDI89120
UniProt: A0A514LB90
LinkDB
Position
complement(1002912..1003463)
AA seq 183 aa
MSENATYPGEKIASIEEYEAGYNAFDDGDMVRAATIGQKDIDKTTRTANIKHPKDLSIPK
VGDIVIGTIAAVMSSMIAVSIDYINGNPTTSKVECVCSTRNIRKRNVALVNDIAKLKILN
HLNGTIHATIDEPNLGILFTKCRKCGGKVVPMRDAIKCTECSWIDERKLSTDFGKSDFIK
LRE
NT seq 552 nt   +upstreamnt  +downstreamnt
atgtcagaaaatgcaacatatccaggcgagaaaatagcatcaattgaagaatatgaggcc
gggtacaatgcttttgatgatggagacatggtaagagcagcaaccattggacaaaaggac
attgataaaactactagaactgcaaatatcaaacatccaaaggatctatcaataccaaag
gtaggagacattgtcattggaacaattgcagcagtaatgtcatccatgattgcagtctca
attgattacattaatggaaatccaaccacatctaaagttgagtgtgtatgttcaacaaga
aacattcgaaaaagaaatgttgcattagtaaatgacatagcaaaattaaaaattttaaat
catctaaacggtacaattcatgcaactattgatgaaccaaatttaggaatactatttaca
aaatgtcgcaaatgtggtggaaaagtagtacctatgcgagatgcaataaaatgtacagag
tgttcatggattgatgaaagaaaactttctacagactttggtaaaagcgatttcattaaa
ctgagagagtaa

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