Candidatus Nitrosopumilus sp. SW: Nisw_06565
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Entry
Nisw_06565 CDS
T06175
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
niw
Candidatus Nitrosopumilus sp. SW
Pathway
niw00750
Vitamin B6 metabolism
niw01100
Metabolic pathways
niw01240
Biosynthesis of cofactors
Module
niw_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
niw00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
Nisw_06565 (pdxS)
Enzymes [BR:
niw01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
Nisw_06565 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
His_biosynth
NMO
IGPS
Peptidase_S66C
Motif
Other DBs
NCBI-ProteinID:
QDI89207
LinkDB
All DBs
Position
1090414..1091382
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AA seq
322 aa
AA seq
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MLPLSGERKDAKGIISEKSESSDVIRGSSTLKRGFAHMLKNGVVMDVTNVEQAQIAEEAG
AVSVMVLDKLPSDVRKAGGVARTASIRIIEEIMDSVTIPVMAKCRIGHVNEALVLQETDV
DMIDESEVLTPADELRHIWKWDLTTPVVNGARSLAEALRRIEEGAAMIRTKGEPGTGNVA
EAITHIKKVNDELRTIKSIYDSGDNQDLVRMAREFKVSYDIVEQTAKLGRLPVVNFAAGG
IATPADAAYLMSLGCDGIFVGSGIFNANDAAERARAIVLATTFWNETDKVKEAQKMIDER
QSMLGLDVKTLELRMQDRGGSA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcttccactatctggagaacgtaaagacgcaaagggaataatttctgaaaaatcagaa
tcatctgatgtcattcgtggttcctctactctaaaacgtggatttgcccacatgctaaag
aacggagttgtaatggatgttacaaatgtagagcaagcccagattgcagaagaagcaggc
gcagtttcagtaatggtactagacaaacttccatctgatgttagaaaggcaggtggcgtt
gcaagaactgcaagtattagaattattgaagaaattatggattcagttacaattcctgta
atggcaaaatgtagaattggtcatgttaacgaagcacttgtcttacaagagacagatgtt
gacatgattgatgaatccgaagtattgactccagctgatgagttacgtcacatctggaaa
tgggatttgacaacacctgttgtaaatggtgctcgttccttggcagaagctttgagaaga
attgaagaaggagctgcaatgatcagaacaaaaggagaaccaggaactggtaatgttgct
gaagcaattactcacatcaaaaaagtaaatgatgaactaagaacaataaaatcaatttat
gattctggagacaatcaagatctagttagaatggcaagagaattcaaagtatcttatgat
attgtagaacagactgcaaaacttggtagattacctgttgtgaattttgcagcaggtgga
attgcaactccagctgatgcagcatatctaatgtcattaggatgtgatggaatctttgtt
ggttcaggaattttcaatgcaaatgatgcagcagagcgtgcaagagcaattgtattggca
actaccttctggaatgagactgacaaggtaaaagaagcacaaaaaatgattgatgaaaga
caatcaatgttaggattagatgttaaaacattagagttacgtatgcaagatagaggcggt
tcagcatga
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