Candidatus Nitrosopumilus sp. SW: Nisw_06695
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Entry
Nisw_06695 CDS
T06175
Name
(GenBank) transcription factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
niw
Candidatus Nitrosopumilus sp. SW
Pathway
niw03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
niw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Nisw_06695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
niw03021
]
Nisw_06695
Transcription machinery [BR:
niw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Nisw_06695
Prokaryotic type
Archaeal type
TFB
Nisw_06695
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_N
Cyclin_C
Zn_Ribbon_TF
Cas9_b_hairpin
Motif
Other DBs
NCBI-ProteinID:
QDI89233
UniProt:
A0A514LBK4
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All DBs
Position
1110321..1111250
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AA seq
309 aa
AA seq
DB search
MNQMLEYCFENKHTSPITDVVTGEICCSDCGAVIIEKTIDRSNGLMTPTKEDYMNKTQNG
PPTKISTSNMSQSTTISRKNHDSTGNRLHNDTRRHFSRLRIWDSRSKIDRNERNLVKAFT
ILDAYASQLGIPENAKEHAAYIYRKAVENNLIMGSSIPSMVAGSVYVACKQLGIPRSADD
TTRICNISKRKLSKAYKRLVKNLELKIDPSETDYISQVANSLSVSEKTKRLAIKIIDDVK
KEKVHVGKKPLGITAAAVYLSAINYSEHVSMAKISKVTNISTVTIRKITKLIKPFAAKYI
ESIDVGVMK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagatgttagaatattgttttgaaaataaacacacatcacccataactgatgtt
gttacaggcgaaatttgttgtagtgattgcggtgcagtgattatagaaaaaacaattgat
cgttcaaatggtttgatgactcctaccaaggaagattatatgaacaaaacacaaaacggc
cctccaacaaaaatatcaacttcaaatatgtctcaatcaacaacgatctcaagaaaaaat
catgattctacgggaaataggctacataatgacactaggagacatttttcaagattaaga
atatgggattcacgcagcaaaattgacagaaatgaaaggaatcttgtaaaggcattcaca
attttagatgcatatgctagtcagctgggtattccagaaaatgcaaaagaacatgctgca
tatatctatagaaaggcagtagaaaataacctcattatgggaagttcgattccctcaatg
gtggcaggatctgtttatgttgcctgcaagcagcttggaattccaagaagtgcagatgat
acgaccagaatttgtaatatcagtaaaagaaaattatcaaaagcgtataaacgtcttgta
aaaaacctagaactaaaaattgatccttcagaaacagactacatatcacaagttgcaaat
tcattatcagttagtgaaaaaacaaaaagacttgcaatcaaaataattgatgatgtcaaa
aaggaaaaagttcatgtgggaaagaaaccgcttggaattactgcagccgcagtatatctt
tctgcaattaattatagtgaacatgtatcaatggcaaaaatttcaaaggtgaccaatatc
agtacagtaacaattagaaaaattactaaactgataaagccgtttgctgcaaaatatatt
gagagcatagatgtaggggtgatgaaataa
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