Candidatus Nitrosopumilus sp. SW: Nisw_07540
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Entry
Nisw_07540 CDS
T06175
Name
(GenBank) DNA-directed RNA polymerase, subunit E''
KO
K15171
transcription elongation factor SPT4
Organism
niw
Candidatus Nitrosopumilus sp. SW
Brite
KEGG Orthology (KO) [BR:
niw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Nisw_07540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
niw03021
]
Nisw_07540
03019 Messenger RNA biogenesis [BR:
niw03019
]
Nisw_07540
Transcription machinery [BR:
niw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
Nisw_07540
RNA polymerase I system
Nisw_07540
Messenger RNA biogenesis [BR:
niw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
Nisw_07540
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
EGF_LMN_ATRN
EGF_laminin
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
QDI89383
LinkDB
All DBs
Position
complement(1259157..1259345)
Genome browser
AA seq
62 aa
AA seq
DB search
MAREMACRKCKYVTVGKVCPVCKSSDLTPDWSGVVLVVDPTNSEISKTLGITQKGKYAIK
VT
NT seq
189 nt
NT seq
+upstream
nt +downstream
nt
atggcacgagaaatggcatgcagaaaatgcaagtatgtaactgttggaaaagtttgtcca
gtatgcaaatcatcagatttaacaccagattggagcggagtagtactagtagtagatcca
acaaactctgagatttcaaaaacacttggcattactcagaaaggcaagtatgcaatcaaa
gtaacataa
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