Candidatus Nitrosopumilus sp. SW: Nisw_07660
Help
Entry
Nisw_07660 CDS
T06175
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
niw
Candidatus Nitrosopumilus sp. SW
Brite
KEGG Orthology (KO) [BR:
niw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
niw03016
]
Nisw_07660 (truD)
Enzymes [BR:
niw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Nisw_07660 (truD)
Transfer RNA biogenesis [BR:
niw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Nisw_07660 (truD)
Prokaryotic type
Nisw_07660 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QDI89407
UniProt:
A0A514LC65
LinkDB
All DBs
Position
1276433..1277629
Genome browser
AA seq
398 aa
AA seq
DB search
MIPTLDSQIGISVYSTKFDGIGGKIRVTPEDFEVSEKILEKTQNSINQEEGYTVYKLKKK
KIDTNHALSDVFKKKGIRLKSLGLKDASAITEQFVCSGNKGKTIEDYSTEKYSLKKVGFV
KKPLSKKDMIGNHFKIKISECSHGLSSFTEFENVLNFYGYQRFGSKRPVTHLIGKAILQR
NFDEAVKLILSFTSDYDSKENNEIRGKLADKQNYKQYFEKIPKQMDIERIVLKELIDHDD
PFRAVRAIPLSLRRFYIQAYQSFIFNNSLSAAFTDGENLFEAKSGDVCFDHKGIIGKFIQ
GLDQNLALPFVGYSYYKKTRFDNQISQILKQEEVSPKDFFIKEMQEVSSEGGFRQAAIDC
SDYSSHDNVVEFTLSRGSFATILLREIMKPSDPISAGF
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
gtgatacccactttagattctcaaattggaatttctgtttatagtacaaaatttgatggt
attggtggaaaaatacgtgtaactccagaagattttgaagtatctgaaaagattttagaa
aaaacacagaactctattaatcaagaagaaggttatactgtttacaaattaaaaaagaaa
aaaattgatacaaaccatgcattatctgatgtttttaaaaagaaaggaattagattaaag
tctctaggcctaaaagatgcatctgcaatcactgagcaatttgtttgttctgggaataaa
ggtaaaacaatagaagattattctacagaaaaatattctttgaaaaaagttggttttgta
aaaaaacccctttcaaagaaagatatgattggtaatcatttcaaaattaaaatctctgag
tgttctcatggattgtcttcttttacagaatttgaaaatgttctaaatttttatggttat
cagagatttggttcaaaaagacctgtgactcatttgataggaaaagcaatacttcaaaga
aactttgatgaagcggttaaactaattttgtcctttacttctgactatgattcaaaagaa
aataatgaaattcgaggtaaacttgctgataaacagaattacaagcaatattttgaaaaa
attccaaagcaaatggatattgaaagaattgttttaaaagaactgattgatcatgatgac
cctttccgtgcagtacgtgcaatcccactatctttgaggcgattttatatccaggcatat
caatccttcatcttcaataactctctaagtgctgcatttactgatggtgaaaatctgttt
gaggccaaatctggtgatgtgtgttttgatcataaagggataattgggaaattcatccaa
gggttagatcaaaatcttgcattgccttttgttggatattcctattacaaaaaaacaaga
tttgataatcaaatctcacagatactcaaacaagaagaagtatctccaaaggatttcttt
atcaaagaaatgcaagaggtaagcagtgaaggtggatttagacaggctgcaattgattgt
tctgattattcttcacatgataatgtcgtagaatttacattatcaagaggttcttttgca
acaattctgctgagagagataatgaaaccatctgatccaatttctgctggtttttga
DBGET
integrated database retrieval system
