Candidatus Nitrosopumilus sp. SW: Nisw_08150
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Entry
Nisw_08150 CDS
T06175
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
niw
Candidatus Nitrosopumilus sp. SW
Pathway
niw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
niw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Nisw_08150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
niw03400
]
Nisw_08150
Enzymes [BR:
niw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Nisw_08150
DNA repair and recombination proteins [BR:
niw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Nisw_08150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QDI89496
UniProt:
A0A514LCA9
LinkDB
All DBs
Position
complement(1365081..1365671)
Genome browser
AA seq
196 aa
AA seq
DB search
MNQLETVKQNVIKCTKCDLCKTRTNSVPGKGNFESDVIFVGEAPGRNEDKNGEPFVGVAG
KKLSAALEGAGISREDVYITNVVKCRPPNNRVPNTKERDTCKEYLKKEISIIKPKIICVL
GNTAFNSVLGGSEITKFRGKLVRKDDQLYFLTIHPAATIYNQELISTLNEDIVKLFDLIR
ELKNNKAVMIDIEYTS
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaactagagacagtaaaacaaaatgtaatcaaatgtacaaagtgtgatttatgt
aaaaccagaacaaattctgttccaggaaaaggtaattttgaatcagacgtaatatttgta
ggtgaggcacctggaagaaatgaagacaagaatggagagccatttgtaggagttgcagga
aagaaactatctgcagcacttgaaggagcaggaatttctagagaagatgtatacatcacc
aatgttgtaaaatgtagacctccaaataacagagtgccaaatacaaaagaaagagacaca
tgtaaagaatacctaaaaaaagaaatttcaataataaaaccaaaaattatttgtgtttta
ggaaatactgcatttaattccgtgttgggaggctcagaaattacaaaatttagaggaaag
ttagtacgaaaagatgatcagttgtattttttaacaattcatcctgctgcaactatatac
aatcaagagttaatctcaacattaaatgaagacattgtaaaactatttgatttaatcaga
gagttaaaaaacaataaagcagttatgatagatattgagtacacttcctag
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