Candidatus Nitrosopumilus sp. SW: Nisw_08880
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Entry
Nisw_08880 CDS
T06175
Name
(GenBank) TrmB family transcriptional regulator
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
niw
Candidatus Nitrosopumilus sp. SW
Brite
KEGG Orthology (KO) [BR:
niw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
niw03000
]
Nisw_08880
Transcription factors [BR:
niw03000
]
Prokaryotic type
Helix-turn-helix
Other families
Nisw_08880
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Gene cluster
GFIT
Motif
Pfam:
TrmB
MarR_2
HTH_20
MarR
HTH_24
HTH_11
wHTH-PRTase_assc
HTH_29
Motif
Other DBs
NCBI-ProteinID:
QDI89627
UniProt:
A0A514LCT3
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Position
complement(1481237..1482076)
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AA seq
279 aa
AA seq
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MMSYEDQVSGIAAELEEILDLDDLEAKVYLNLLRAGPITASALAKELDIDRARMYRTVDR
LVSRNIISTTLSSPKLCIAVEPHEALKITLGKKEDEVNKIKKSGEAIIEKINNEITTNQS
SSIPTFRVVQGRQNIYADIAQMIEETTDVLYIVTTLDDVSRMYHSTIPEKITICEKNGGS
VRLLVDMNDTKLTPFVKRFNATETKIGKLPSKGRLIVQKDKKMIMSDSAASFQHSNSDSD
FSLCTNSTEMVDNIFTLCKFLWETSNPLKTIDVKNFVSN
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatatgaggatcaagtaagcggaattgccgcagaactagaggaaattctggat
ttagatgatttagaggctaaagtttaccttaatttacttagagcaggtcccataactgcc
agtgcattagcaaaagagttagatattgacagagcaagaatgtacagaacagtagataga
ctagtaagcagaaatattatttcaactacattatctagcccaaaattgtgtattgcagtt
gaaccgcacgaagcattgaaaataacattaggtaaaaaagaagatgaagtaaataaaatc
aaaaaatcaggagaggccattattgaaaagatcaataatgaaattacaacaaatcaaagt
agttcaattccaacatttagagtggtacaaggtcgccagaacatttatgcagatattgca
cagatgattgaagaaacaacagatgtgttatacattgttacaacattagatgatgtttca
agaatgtatcatagtaccataccagaaaaaattaccatatgtgaaaagaatggaggtagt
gtgagactattggttgatatgaatgatacaaaactcacaccatttgtaaagagattcaat
gcaactgaaactaaaattggtaaattaccatccaaaggaagattaattgttcaaaaagac
aaaaaaatgataatgtcagattctgcagcatcatttcagcattctaattctgattctgat
ttttcattatgtacaaactcgactgaaatggtagacaatatctttacactctgtaaattt
ttgtgggaaacatcaaatccactaaaaacaattgatgtaaagaatttcgttagtaattaa
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