Ningiella algicola: PN836_005955
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Entry
PN836_005955 CDS
T11592
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
Organism
nix Ningiella algicola
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
nSTAND_NTPase5
Tetraspanin
YomV_2nd
PH_40
Reticulon
Epiregulin_C
DUF4131
Motif
Other DBs
NCBI-ProteinID:
XJJ52384
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Position
1298847..1302425
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AA seq
1192 aa
AA seq
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MEKKSAPNKFVKFITNKWFLHGLGLFILALLVWFVGPIIAISENYFLESVASRLLLILFI
VFSWALYQFYQHYKRRKNDSQFAENLTVQNAKKDEAQTISDRFNEAINILQAKSGNKRDK
NAQLNALPWYIIIGPPGSGKTTALLNSGLEFPLKDKLGADAIKGIGGTRHCDWWFTNEAV
LIDTAGRFTTQDSDSEVDKTAWQSFMSMLKKHRKQRPINGALVTMSLSDMLTMPEDERTY
YAKTIRKRIEELNDQLSIKFPVYFMFTKCDLVNGFIPFFDALSAKQRDQVWGETFDIDEN
GNCAIDIQQYHEHFDELIDRLNTQLLLNIKQQHDPAKKADIFSFPSQMDALKEPIHDFLV
NIFGENKFQKTALLRGVYFTSGTQQGSPFDSLLGTMANDMGLQEETAVNYSGRGKSYFIS
DLLSQVIFPESEMAGVDQKLQRWMKRLRILSLVSASAVIIAMSIVWYTSYEINVDRIQRI
DASIEQQNELIIQRSESTIDFMEILDELNAARAATTIFEPKEFSDNFGLNQRRSFDSQNQ
AIYLNVLETRLLPLVKTRLEEIMIDILRQGDHADLYTFLKAYLMYAGQHTIAGAELEPEW
LKAIALADWQVSLLAEPEAVVQLNAHLDYLLSQPFAFIMPDENVVSSARLALLKLPLEEQ
VYAAIKDFMLSDKSGDLSFSDIAGNDAIDVFVTRDARLPSELYIPFMFTKKGFFSSFIST
ASDKADEYLNNTWILGEHNKQDDIPSPDELQDRIYTIYYRDYIGTWRQYLRNLEIADVSN
QQQGFSILRTIGDQNSPLEKLLTTVSQETNLTQVSEEGEQAQALGEVASVVNARAQRVVS
QANRVSRAANKADLVSLPGSEVTENFSEFHQLSSTERGDPKLLAISNGLNQYSSFIEQTL
LDNFAETPAFNAVLDRMNNPARSEFSRLVMKDSTNPEALNRWLDEVSDIGWSMVVQDAKD
NIEQIWQQQVYPIYSQALAGRYPFETQSMSEVELRDFANFFKPNGVFDEFVKQYIVPFVN
TNTASWQLRSFGGQSLNFSPQVLSDMQTANRITQYFFTPNAAMPSLSFSMLPLSLDANVA
QFSMNVGSQKLSYAHGPRRSSKITWPLVASDESTRIEFMQLDGRVKQATETGPWSLFKLL
DKQRMSATPRNAVYNANISVEGLSVQYEIRADSEFNPLGAKILQNFTLPEEL
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaagtctgcccctaataaattcgtgaaattcatcaccaataagtggtttttg
catggtttagggctgtttatattagctctgctggtatggtttgttggccctatcattgcc
atttcagaaaattattttctcgaaagtgtcgcgagccgactcctgctgattttattcatt
gtgttctcatgggcgctgtatcagttttatcagcattacaaacgacgcaaaaatgacagt
caatttgctgaaaacctaactgttcaaaatgcgaagaaagacgaagcgcaaaccatttcc
gaccgcttcaatgaagcaattaacattctacaagcgaagtcgggtaacaagcgcgataag
aatgcccagctcaatgctttaccttggtatatcattattggcccacctggttccgggaaa
accacagccttattaaactctggtttggaatttccacttaaagataaattaggtgcagat
gcaatcaagggcatcggcggcactcgacattgcgactggtggttcaccaacgaagctgta
ctgattgacaccgcaggtcgttttactactcaagatagtgattcagaagtagacaagact
gcgtggcaaagctttatgtcgatgcttaaaaagcatcgtaaacagcgcccaataaacgga
gcgttagtcactatgagcctatctgacatgctgactatgcccgaagatgagcgcacctac
tacgccaagaccattcgtaagcgaatagaagaacttaatgaccaattgtcaattaagttt
ccagtgtatttcatgttcaccaaatgtgacctagtgaatggctttattcccttttttgat
gcgctaagcgctaagcagcgcgaccaggtttggggagaaacctttgacatagacgaaaac
gggaattgcgcaatcgatattcagcaataccacgagcactttgacgaactcatcgatcgt
ctaaacactcagcttctgctcaatataaagcaacagcatgatccggcgaaaaaagccgat
atctttagcttcccatcgcaaatggatgcgctcaaagaacctattcatgactttctcgtc
aatattttcggcgaaaataagtttcaaaaaaccgctttgcttcgaggggtttattttacg
tccggcactcaacaaggcagcccatttgacagccttttaggcaccatggcgaatgacatg
ggcttacaagaagaaactgccgtcaactatagcggacgaggaaaaagctatttcattagt
gacttgctcagtcaagtaattttccctgagtcggaaatggcgggcgtcgatcaaaaactt
cagcgctggatgaaacgtcttcggatcctcagtttagtcagtgcatcggctgtcattatc
gcaatgagcatagtctggtataccagttacgaaatcaatgtagataggatccagcggatt
gatgcatcgatagagcagcagaacgagctgattattcaaaggagcgaaagcaccattgat
ttcatggaaatattggatgaactcaacgccgcccgggcagcaactactatttttgagcct
aaagaattctctgataattttggtttgaaccaacgacgaagtttcgacagccaaaaccaa
gcgatttaccttaatgtactcgaaactcggcttttacccttggttaaaacgcgcttggaa
gaaattatgattgatattcttcgccaaggtgaccacgcagatttatatacattcctaaaa
gcctatttgatgtacgctggtcaacataccattgccggcgcagagttggagcctgagtgg
ttaaaggccattgcattagccgattggcaagtcagtttattggcagagcctgaagcggtt
gtgcaactcaatgctcacttagactatctgctgtcgcaaccatttgcgtttattatgcct
gatgaaaacgtggtctcctcggctcgccttgccttgttaaaactgcctttggaagaacaa
gtttatgcggcaatcaaagattttatgctgtcggataaaagcggcgatttgtcattttca
gatatcgcaggtaatgatgcaattgacgtatttgtgacgcgcgatgccaggctacccagc
gaactatacattcccttcatgtttactaaaaagggcttcttttccagctttattagcacc
gcctccgataaggcagatgagtatttaaacaacacatggatattaggcgagcataataaa
caggacgatattccgtctccagacgaattacaggatcgaatctatacaatatattacaga
gattacattggcacgtggcggcaataccttcgtaatcttgaaattgctgatgtgagtaat
cagcagcaagggttctctatattgcgaaccataggtgatcaaaacagtcccttggaaaaa
cttctgactaccgtatcgcaagagactaacttgacgcaggtgagtgaagagggcgagcaa
gcccaagcacttggcgaagtggcaagtgttgtaaacgcgagagcacaaagagtagtgagc
caagccaaccgcgtatctagagcggctaacaaagctgacttggtaagccttccgggaagt
gaagtgactgagaatttcagtgagtttcatcaactaagttctacagagcgtggagaccct
aaactgttagcgatttcgaatggtttaaatcagtacagcagttttatagagcaaactctg
ctggacaactttgctgagacgcctgcctttaatgctgtgctagaccgcatgaacaatcct
gctcgctcggagtttagtcgtttagtaatgaaagactccaccaacccagaagcgttaaac
agatggctcgatgaagtatcagatattggttggtctatggtcgtgcaagatgcgaaggat
aatattgaacaaatttggcagcaacaagtgtatcctatttattcgcaagcacttgctggg
cgttacccttttgaaacccaatcaatgagtgaagttgagctgcgcgactttgccaacttc
tttaagccaaatggcgtgtttgatgagtttgttaagcagtatatcgtgccctttgtaaat
accaataccgcttcttggcaattacgctcatttggcggtcagtcgctgaacttttctcca
caagtgctttcggacatgcaaacggcgaatcgaattacccaatacttctttacgccaaat
gcagctatgccgagcctatctttttccatgctacctttatcacttgacgccaacgtggcg
caattttcgatgaatgtaggctctcaaaaactaagctatgcgcacggacctagacgctct
agcaaaatcacatggccattggtagcgagtgacgaatctacccgtatcgaatttatgcag
ctagacggacgcgtgaagcaagcgactgagacggggccatggtcgctgtttaaacttcta
gacaaacaacgcatgagcgcgacgccaagaaatgcagtttataatgcaaatattagcgtt
gaaggcttatcggtgcagtatgaaattagagccgacagtgaatttaatcctcttggcgct
aaaatcctgcaaaactttacattgccagaggagctttag
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