Ningiella algicola: PN836_017280
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Entry
PN836_017280 CDS
T11592
Name
(GenBank) RNA polymerase factor sigma-54
Organism
nix Ningiella algicola
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GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
SLFN_nematode
Motif
Other DBs
NCBI-ProteinID:
XJJ50627
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Position
complement(3949009..3950529)
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AA seq
506 aa
AA seq
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MKPSLQLKFSQQLTMTPQLQQAIKLLQLSTLDLQQEIQEALESNPLLEMTEQEFSDGDDS
RGDESKKEKASESNSEQDANSASSAETEVLSGSDNMDSHDALEKGDLPDDLPLDSSWEEY
LGSSSAPIKMVGTNPDDDYVFQGETSDSIQDHLMWQVELTHFSEIDRSIAIAIIDSIDES
GYLTTSSEDILESIDNEEVELDEVECVLKRVQMFDPLGAGARSVQECLSVQLAQFDKDTP
WLDEAKAIINEYSDLLASKDYRTLMRKTKLKEDDLREVMRLLKTLNPRPGSAISAKEPEY
VIPDVNVYKKNGVWTVELNNDALPALSVNETYASLGKTTKNPNDSQFIKSHLQEAKWFIK
SLESRNETLLKVSHCIVSRQREFFEKGPEKMVPMVLNDVAEMVDMHESTISRVTTQKYMH
TPRGIFELKYFFSSHVATESGENCSSTAIRALIKKLVAVEPTSKPLSDSKIAQMLAEQGI
QVARRTIAKYRESLNIPPSNQRKSLI
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccctcgttacaactaaagtttagtcagcagctcaccatgacgccgcagcttcag
caggcgataaaactcttgcagctatctactttagatttacaacaggaaatccaagaggct
ttagaatcaaacccccttcttgagatgactgagcaagagttctcagatggtgatgattca
cgaggcgacgaatccaaaaaagaaaaggcgtcagagtcaaattcagaacaagacgcaaac
tctgcctctagcgccgaaacagaagtactctctggcagtgacaatatggatagccacgac
gcgcttgaaaaaggtgatctgccggatgacctaccccttgatagctcttgggaggaatat
ttgggctcaagctctgcgcccattaaaatggtgggcactaatcctgatgatgattatgtg
tttcaaggggaaacgtcggatagcattcaagatcacctcatgtggcaagtggaactcacg
cacttttcagaaatcgaccgctctattgccatcgcaattattgactcgattgatgagtcg
ggatatctgaccaccagcagtgaagatattttagaaagcattgacaacgaagaagttgag
cttgacgaagtcgaatgtgtactcaaacgtgtgcaaatgtttgatcccctaggcgcagga
gctcgctctgtgcaagagtgtctcagcgtccagctagcgcaattcgataaagacacgcct
tggttagacgaagcgaaagcgattatcaatgaatactccgatttgctagcgagtaaagac
tatcgcacgctaatgcgaaaaacgaagctcaaagaggacgaccttcgagaggtgatgcgc
ttactaaaaacgctcaatcctcgcccaggcagtgcaatctccgcgaaggagcctgaatat
gtcattcctgacgtgaatgtatacaaaaagaacggtgtttggacggtcgaattaaataac
gatgcattgcctgcactttcagtaaacgaaacctatgcgagcttaggaaaaacaacaaaa
aacccgaacgattctcagtttattaagtcacatttacaagaagcaaaatggtttatcaaa
agcttagagagccgcaacgagactttactcaaagtctctcattgtattgtgtcacggcag
cgagagttttttgaaaaaggccctgagaaaatggtgcctatggtgcttaatgacgtagcc
gaaatggtggatatgcatgaatcaactatttcccgcgtaaccacgcaaaaatatatgcat
acgcctcgcggtatatttgaattaaagtatttcttttcttcacatgtggcaaccgaatca
ggcgaaaattgttcttctactgcaattagagccttaattaagaagctggttgcggtagag
ccaacaagcaagccattaagtgatagtaaaattgcacaaatgctcgctgaacaaggcatt
caggttgctcggcgaaccattgcaaaatatcgggaatcgttaaacattcccccatccaac
caaagaaagagtcttatatag
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