Nitratireductor mangrovi: FQ775_00905
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Entry
FQ775_00905 CDS
T06518
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
niy
Nitratireductor mangrovi
Pathway
niy00010
Glycolysis / Gluconeogenesis
niy00020
Citrate cycle (TCA cycle)
niy00260
Glycine, serine and threonine metabolism
niy00280
Valine, leucine and isoleucine degradation
niy00310
Lysine degradation
niy00380
Tryptophan metabolism
niy00620
Pyruvate metabolism
niy00630
Glyoxylate and dicarboxylate metabolism
niy00640
Propanoate metabolism
niy00670
One carbon pool by folate
niy00785
Lipoic acid metabolism
niy01100
Metabolic pathways
niy01110
Biosynthesis of secondary metabolites
niy01120
Microbial metabolism in diverse environments
niy01200
Carbon metabolism
niy01210
2-Oxocarboxylic acid metabolism
niy01240
Biosynthesis of cofactors
Module
niy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
niy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
niy_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
niy_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
niy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
FQ775_00905 (lpdA)
00020 Citrate cycle (TCA cycle)
FQ775_00905 (lpdA)
00620 Pyruvate metabolism
FQ775_00905 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
FQ775_00905 (lpdA)
00640 Propanoate metabolism
FQ775_00905 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FQ775_00905 (lpdA)
00280 Valine, leucine and isoleucine degradation
FQ775_00905 (lpdA)
00310 Lysine degradation
FQ775_00905 (lpdA)
00380 Tryptophan metabolism
FQ775_00905 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
FQ775_00905 (lpdA)
00670 One carbon pool by folate
FQ775_00905 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
niy04147
]
FQ775_00905 (lpdA)
Enzymes [BR:
niy01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
FQ775_00905 (lpdA)
Exosome [BR:
niy04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
FQ775_00905 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
HI0933_like
NAD_binding_8
DAO
GIDA
FAD_binding_2
UDPG_MGDP_dh_N
3HCDH_N
FAD_binding_3
FAD_oxidored
AlaDh_PNT_C
DUF1846
AlkA_N
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
QDY99042
UniProt:
A0A5B8KTZ8
LinkDB
All DBs
Position
complement(4717918..4719315)
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AA seq
465 aa
AA seq
DB search
MRDIKCQLLVIGAGPGGYVCAIRAGQLGIDTVIVEAKKPGGTCLNVGCIPSKALIHAADE
HARLADYAAGRSALGIRAEKPAIELARTVEWKDGIVRRLTNGVSGLLKKAGVKHVDGWAS
FRDGKTVRVETQTGMQTIEADNIVIATGSTSVELPGIGFGGNVISSTEALGLTTVPKRLA
VVGAGYIGLEMGTAFAKLGAEVTVLEAMDCILPLYDEELTKPVRKRLEKLGVTVLTGVKA
ERYSESAKTLSYSNGDGKSDTVSADKVLVTVGRKPATESWGLEELDLSMDGRHIAIDEHC
RTSMRGVYAIGDVTGEPMLAHRAMAQGEMVAEIVAGKRRAWDRQCIPSVCFTDPEIVSAG
LSPEEAAEAGIDARSAIFPFQANGRTMTLGREDGFVRIVARADNHLVIGIQAVGAQISEL
SSYFAHAIEMGARLEDIAQTIHAHPTLSEAVQESALRTLGHALHI
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgagagacatcaagtgccaactgctcgtgatcggcgctggaccgggtggctatgtctgc
gccatccgcgccggacagctcggcatcgacaccgtcatcgtagaggccaagaagccgggc
ggcacctgcctcaatgtcggctgcatcccgtcgaaggcgctgatccacgccgcggacgaa
catgccaggctggctgactacgccgccggccgctcggcgctcggcatccgcgctgaaaag
ccggcgatcgagcttgcgaggaccgttgagtggaaggacgggattgtgcgccggctcacc
aatggcgtcagcggccttctaaagaaggcaggcgtcaagcatgtcgacggctgggccagc
tttcgtgacggcaagacagtacgcgtcgagacgcagaccggcatgcagacgatcgaagcc
gacaacatcgtcatcgccacgggatcgacttcggtcgaacttcccggcatcggctttggc
ggcaacgtgatctcgtcgaccgaagcgctcggactcacgaccgtgccgaaacggctcgca
gtcgtcggtgccggctatatcggtcttgagatgggcaccgcattcgccaagctcggggcc
gaggtcaccgtgctggaagcgatggactgcatcctgccgctctacgacgaggagttgacc
aagccggtccgcaagcggctggaaaagctcggcgtcacggtgctcaccggcgtgaaggcc
gaacgctattcggaaagcgcgaagacgctttcctattcgaacggcgacgggaaatccgac
accgtcagtgccgacaaggttctcgtcaccgtcggccgcaaacccgcgaccgaaagctgg
gggctcgaggaactcgatctctcaatggacggacgccatatcgcgatcgacgagcattgc
cgcacctcgatgcgcggcgtctacgccatcggcgacgtcaccggcgaaccgatgctggcc
catcgcgctatggcgcaaggggagatggtggccgagatcgtcgccggcaagaggcgcgcc
tgggatcgtcaatgcatcccgtcagtgtgcttcactgaccccgaaatcgtgtcagcaggc
ctctcgccggaggaagctgccgaggcggggatcgacgcgcgcagcgcgatcttcccgttt
caggccaacgggcggacgatgacgctcgggcgcgaggacggcttcgtacggatcgtggca
cgagccgacaaccatctcgtcatcggcattcaagccgtaggcgcgcagatttccgaactg
tcgtcctatttcgcgcacgcgatcgagatgggcgcccggctggaggacatcgcgcagacc
attcacgcccatccgaccctttccgaggcggtgcaggaaagcgcgttgaggacgctgggc
catgccctccacatctga
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