Nitratireductor mangrovi: FQ775_01720
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Entry
FQ775_01720 CDS
T06518
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
niy
Nitratireductor mangrovi
Pathway
niy03410
Base excision repair
niy03430
Mismatch repair
niy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
niy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FQ775_01720 (recJ)
03430 Mismatch repair
FQ775_01720 (recJ)
03440 Homologous recombination
FQ775_01720 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
niy03400
]
FQ775_01720 (recJ)
DNA repair and recombination proteins [BR:
niy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FQ775_01720 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FQ775_01720 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FQ775_01720 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Toprim
Motif
Other DBs
NCBI-ProteinID:
QDZ03163
UniProt:
A0A5B8L623
LinkDB
All DBs
Position
complement(1926250..1928040)
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AA seq
596 aa
AA seq
DB search
MAMSEARFFLDVKRSATGLAWVHRLSERAENDALTIAQTHGVPDIVARVLAGRGIGAEAT
RQFLDPTIRDLLPDPASLTDMAKAAARLAEAIRRRERVAIFGDYDVDGAAASALLKRFLR
HFGVETEIYIPDRVFEGYGPNPDAMRELIGRGASLIVTVDCGTNSSPSIDAANEAGADVV
VLDHHQVGGPLPAAIAVVNPNRDDDLSGQGHLCAAGVTFVALVATAKVVRDGGWTGPLPD
LLSFLDLVALATVCDVVPLAGVNRAFVVKGLIAARHQQNPGLAALQRVARIGEPTNTFHL
GYLIGPRINAGGRIGDAALGSRLLAEDDPARAREIAEQLDRLNQERQQMERAMLDEARAE
AEAELAAGRGPAVLVTASESWHPGIVGLIAARLKEQFRRPVFAVAFNPNGEGTGSGRSIA
GFDLGRLVREAAARELIVKGGGHAMAAGITVKRERLGALRAFFEERAGEDVFRLRDEQSV
KIDAALAAEGATLELLDMIDKAGPYGAGHAQPVFALPRHQLANVRPVGQNHLRLDLRSGA
GGRLQAVAFRAAETELGRFLFENRGRAIHAAGTLSANYWNGVKSAQFRLTDAAAAE
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggccatgtctgaggcgcggttttttctcgacgtgaagcgctcggcgaccgggctcgcc
tgggttcaccgcctcagcgagcgtgcggaaaacgatgcgctgacgatcgcgcaaactcac
ggcgtgcccgacatcgtggcccgtgtactcgcgggccgcggcatcggtgccgaggcgacg
cgacagtttctcgacccgaccattcgcgatctcttgcccgacccggcctcgctcaccgac
atggcgaaggccgctgcacgattggcggaagccattcgccggcgcgagcgggtggcgatc
ttcggcgattacgatgtcgacggtgccgccgcttcggcgctcttgaaacgcttcctgcgc
catttcggggtagagaccgaaatctacattcccgatcgcgtcttcgagggttacggcccg
aaccccgatgctatgcgcgaactgatcgggcgtggggcttcgctgatcgtcaccgtcgac
tgcggcacaaacagctctccctcgatcgacgccgccaacgaggccggtgccgatgtcgtc
gtgctcgatcaccaccaggtcggcggcccgcttcccgccgctatagccgtcgtcaatccc
aatcgcgatgatgatctttctgggcaggggcatctttgcgcggctggcgtcacctttgtc
gcgctcgttgctacggccaaggtcgtgcgcgacggcggctggaccggcccgctgcccgat
cttctttccttcctcgacctcgtcgcgctggcgacggtgtgcgacgtggtgccgctggcc
ggtgtcaaccgggccttcgtcgtgaagggcctgatcgcggcgcgtcatcagcagaacccc
ggccttgcggccttgcagcgcgtggcgcgcatcggcgagccgaccaacaccttccatctc
ggttatctgatcggaccgcgcataaatgccggcggccgaattggtgacgctgcccttggg
tcgcggctgctggccgaggacgatcccgcccgcgcccgtgagatcgccgaacaactcgac
cgcctcaaccaggagcgccagcagatggaacgcgcgatgctggacgaggcgcgtgcggag
gcggaggccgagcttgccgcgggcagggggcctgccgtgctcgtcaccgccagcgagagt
tggcatccgggcatcgtcgggttgatcgcggcacggctgaaggaacagttccgtcgcccg
gtctttgccgtcgcgttcaacccaaacggtgagggaacaggctcggggcgctcgattgcc
ggtttcgatctcggccgtctggtgcgcgaggcggcggcacgcgaactgatcgtcaagggc
ggcggccatgcgatggcggcaggcatcacggtgaaacgcgagaggctcggtgcgctccgg
gcttttttcgaggagcgtgccggcgaggacgtcttccggctgcgcgacgagcagtcggtg
aagatcgatgcagcccttgccgccgagggcgcaacgctcgaactgctcgacatgatcgac
aaggcaggcccgtatggcgccggccacgcgcagccggtcttcgcgttgccgcggcaccag
ctcgccaatgtccgcccggtgggacagaatcacctgcgccttgacctgcgctcgggggca
ggagggcgcctgcaggcggtggcgtttcgcgccgccgagaccgagcttgggcgcttcctg
ttcgaaaatcgcggccgtgccatccacgcagccggtacgttgtcggccaactactggaat
ggcgtgaaatcggcgcagtttcgcctgaccgacgcggcggccgccgaatag
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