Nitratireductor mangrovi: FQ775_13260
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Entry
FQ775_13260 CDS
T06518
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
niy
Nitratireductor mangrovi
Pathway
niy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
niy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FQ775_13260 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
niy03019
]
FQ775_13260 (pnp)
03016 Transfer RNA biogenesis [BR:
niy03016
]
FQ775_13260 (pnp)
Enzymes [BR:
niy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FQ775_13260 (pnp)
Messenger RNA biogenesis [BR:
niy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FQ775_13260 (pnp)
Transfer RNA biogenesis [BR:
niy03016
]
Prokaryotic type
tRNA degradation factors
FQ775_13260 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
QDZ01271
UniProt:
A0A5B8L078
LinkDB
All DBs
Position
4587822..4589972
Genome browser
AA seq
716 aa
AA seq
DB search
MFNHHKVEIEWGGRPLILETGKVARQADGAVIATYGETVVLATVVSEKQPKPGFDFFPLT
VNYQEKTFAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFAEGYKNDTQVVLTVLQH
DLENDPDIVAMVGASAALTLSGVPFMGPIGAARVGYINGEYVLNPHVDEMPESKLDLVVA
GTGDAVMMVESEAHELSEEVMLGAVMFGHKGFQPVIDAIIKLAEVAASEPRDHQTADLSE
LESTMLGLVEDELRAAYKITDKQDRYAAVDAAKAKVKATLLPEGAEETVWSSEQVNAVFK
ELQAKIVRWNILDTGLRIDGRDLKTVRPIVSEVGVLPRTHGSAVFTRGETQAVVVATLGT
GEDEQFVDALTGTYKETFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPMLPGA
EQFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLAAPVAGIAMGLILEGDRYAVL
SDILGDEDHLGDMDFKVAGTSAGITSLQMDIKIAGITEEIMKVALEQAKGGREHILGEMA
KAISEGRSELGEFAPRIEVMTIPTDKIRDVIGSGGKVIREIVEKTGAKINIEDDGTVKIA
SSNAKEIEAAKKWIHTIVAEPEVGEIYEGTVVKTADFGAFVNFFGPKDGLVHISQLAAER
VAKTTDVVKEGDKVYVKLMGFDERGKVRLSMKVVDQETGKEIARERKKEEAEGTDA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatcaccacaaagtggaaatcgaatggggcggtcgtccgctcatcctcgaaacc
ggcaaggtcgcgcgccaggccgacggcgccgtcatcgccacctatggcgagaccgtcgtg
ctcgccactgtcgtttcggaaaaacagcccaagccgggcttcgacttcttcccgctgacc
gtcaactaccaggaaaagaccttcgcggccggcaagatccccggcggcttcttcaagcgt
gaaggccgtccgagcgaaaaggagacgctaacctcgcgtctcatcgaccggccgatccgt
ccgctcttcgccgaaggctacaagaacgacacccaggtcgtgctgaccgtgctgcagcat
gacctcgaaaacgatcccgacatcgtcgccatggtcggcgcttccgccgcgctgacgctg
tccggcgtgcccttcatgggcccgatcggcgccgctcgtgtcggctacatcaacggcgaa
tacgtgctcaacccgcatgtcgacgagatgccggaatccaagctcgacctcgtcgtcgcc
ggtaccggcgatgccgttatgatggtcgaatcggaagcgcatgagctttccgaggaggtc
atgctcggcgccgtcatgttcggccacaagggcttccagccggtgatcgacgcgatcatc
aagctggccgaagtggccgccagcgaaccgcgcgatcaccagaccgctgacctgtccgag
ctcgaatcgaccatgctcggcctcgtcgaggacgagttgcgcgccgcctacaagatcacc
gacaagcaggaccgttacgccgccgtcgacgccgccaaggccaaggtcaaggcgacgctt
ctgcccgagggcgctgaagagaccgtgtggtcgtccgagcaggtcaacgcggtgttcaag
gaactgcaggccaagatcgtccgctggaacatcctcgacaccggcctgcgcattgacggc
cgcgacctgaagacggttcgcccgatcgtgtcggaagtcggcgtcctgccgcgcacccac
ggctcggccgtcttcacccgtggcgagacccaggccgtcgtggtcgccacgctcggcacc
ggcgaggatgagcagttcgtggatgccctcaccggcacctacaaggaaaccttcatgctg
cactacaacttcccgccctattcggtgggcgagacgggccgcatgggttcgccgggacgg
cgcgaaatcggccacggcaagctcgcctggcgcgccatccacccgatgctgccgggcgcc
gagcagttcccctacacgctgcgcgtggtctccgagatcaccgagtccaacggctcgtcc
tcgatggcgaccgtctgcggcacctcgctggcgttgatggatgccggtgtgccgctggcc
gcgccggtcgccggcatcgccatgggtctcatcctcgagggtgatcgctacgcggtgctg
tccgatatcctcggtgacgaggatcatctcggcgacatggacttcaaggtcgccggcacc
agcgccggcatcacctcgctgcagatggacatcaagatcgccggcatcaccgaggagatc
atgaaggtcgcgctcgagcaggccaagggcggccgcgagcacattctcggcgagatggcc
aaggcgatttccgagggccgttcggaactcggcgagttcgccccgcgcatcgaggtcatg
accatcccgaccgacaagatccgcgacgttatcggctccggcggcaaggtcattcgcgag
atcgtcgagaagaccggcgccaagatcaacatcgaggacgacggtaccgtcaagatcgcc
tcttccaacgccaaggaaatcgaggcggccaagaagtggatccacaccatcgtggccgag
cccgaggttggcgagatctacgagggcacggtcgtcaagaccgccgatttcggggccttc
gtcaatttcttcggtcccaaggacggcctcgtccacatctcgcagctggcggcggagcgc
gtcgccaagaccaccgacgtggtcaaggaaggcgacaaggtctacgtcaagctgatgggc
ttcgacgagcgcggcaaggtccggctttccatgaaggtcgtcgatcaggagaccggcaag
gaaatcgccagggaaaggaagaaggaagaggcggaaggcaccgacgcctga
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