Nitratireductor mangrovi: FQ775_13285
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Entry
FQ775_13285 CDS
T06518
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
niy
Nitratireductor mangrovi
Brite
KEGG Orthology (KO) [BR:
niy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
niy03016
]
FQ775_13285 (truB)
Enzymes [BR:
niy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FQ775_13285 (truB)
Transfer RNA biogenesis [BR:
niy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FQ775_13285 (truB)
Prokaryotic type
FQ775_13285 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DUF4884
Motif
Other DBs
NCBI-ProteinID:
QDZ01275
UniProt:
A0A5B8L034
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All DBs
Position
4583896..4584879
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AA seq
327 aa
AA seq
DB search
MARRGKKKGRPVSGWLVLDKPVGMGSTEAVSKVKWLFKADKAGHAGTLDPLASGMLPIAL
GEATKTVPYVMDGAKVYRFTVAWGAERTTDDLEGEVTATSDKRPTEAEIRALLPRYTGII
MQVPPQFSAVKIAGERAYDIARDGEAVVIPPREVEIGRLELVGRPDDASAVFEIECGKGT
YVRSLARDMGRDIGCYGHIADLRRVEVDPFTADDLVTLAALEQAAAEAAPRGEADAEGRI
VDPRPDKERFAALDALLIDTGAALDCLPAIPVSDDAAQRIRLGNPVIVRGRDAPVEAPEA
YATARGRLVAIGAVEAGMFKPKRVFAG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgccgcggcaagaagaagggccgtccggtctccggctggctggtgctcgacaag
ccggtcggcatgggctcgaccgaggccgtctccaaggtcaagtggttgttcaaggccgac
aaggccggccatgccggaacgctcgacccgctcgcctccggcatgctgccgatcgcgctc
ggcgaggcgaccaagacggtgccctacgtcatggacggcgccaaggtctatcgcttcacg
gttgcctggggtgccgaacgcaccaccgacgatctcgagggcgaggtgaccgccacctcc
gacaagcggccgaccgaggccgagatacgcgcgctgctgccgcgctataccggcatcatc
atgcaggtgccgccgcaattctccgcggtcaagatcgccggcgagcgcgcctacgacatc
gcccgcgacggcgaggcggtggtcatcccgccgcgcgaggtcgagatcggacggctggaa
ctggtcgggcggccggatgacgccagcgcggtcttcgagatcgaatgcggcaagggcacc
tatgtgcgctcgctcgcccgcgacatgggccgcgacatcggctgctacggccacatcgcc
gatcttcgccgcgtcgaggtcgatcccttcaccgccgacgatctggtcacgctggccgcg
ctggaacaggcggcggccgaggccgcgccgcgcggcgaggccgacgccgaaggccgcatc
gtcgatccgcgtccagacaaggagcgtttcgccgcgctcgacgcgctgctgatcgacacc
ggtgccgcgctcgattgcctgcccgccatccccgtcagcgacgacgcggcgcagcgcatc
cggctcggcaacccggtcatcgtccgcggccgcgacgcgccggtcgaggccccggaggcc
tatgccacggcgcgcggccgcctggtcgccatcggcgccgtcgaggccggcatgttcaag
cccaagcgcgtcttcgccggctga
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