Nitratireductor mangrovi: FQ775_16640
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Entry
FQ775_16640 CDS
T06518
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
niy
Nitratireductor mangrovi
Brite
KEGG Orthology (KO) [BR:
niy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
niy03016
]
FQ775_16640
Enzymes [BR:
niy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FQ775_16640
Transfer RNA biogenesis [BR:
niy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FQ775_16640
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
ANAPC5
Motif
Other DBs
NCBI-ProteinID:
QDZ01872
UniProt:
A0A5B8L2E0
LinkDB
All DBs
Position
complement(3876464..3877081)
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AA seq
205 aa
AA seq
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MTIRFHRNDLPDLARYDVEAIAIDTETLGLNPHRDRLCVVQLSPGDGSADVVQIDRGQKK
APHLVSLLRNRKVTKIFHYARFDLAVLSNAFGAMPQPVFCTKIASRLTRTYTDRHGLKDI
CAELLGVPLSKAQQSSDWAAEILSAEQLEYAASDVLHLHALREALVGRLAREGRTAEAEA
CFRFLPTRARLDLMGWGEEDIFAHS
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaccatacgctttcaccgcaacgatctgcccgaccttgcccggtacgatgtcgaggcg
atcgccatagacaccgagacgctggggctgaaccctcatcgcgaccggctttgcgtcgtc
cagctatcgcccggcgatggctccgccgacgtcgtccagatcgaccgcggccagaagaag
gcgccccatctcgtcagcctgctgcgaaaccgcaaggtcaccaagatcttccactatgcc
cgcttcgacctggcggtgctgtcgaacgccttcggggcgatgccgcagccggttttctgc
accaagatcgcctcccggctcacccgcacctatacggaccgccacggtctcaaagacatc
tgcgccgagttgctgggcgtaccgctgtcgaaggcgcagcagtcatccgactgggcggcc
gagatcctttcagcggagcagctcgaatatgccgcctctgacgtgctccatctccatgcc
ttgcgcgaagcgctggtcgggcggctggcgcgggaaggccgcacggccgaggccgaggcc
tgtttccgcttcctgccgacccgcgcgcggctggacctgatgggctggggagaagaagac
atcttcgcccatagctga
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