Nitratireductor mangrovi: FQ775_16655
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Entry
FQ775_16655 CDS
T06518
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
niy
Nitratireductor mangrovi
Pathway
niy03030
DNA replication
niy03410
Base excision repair
niy03420
Nucleotide excision repair
niy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
niy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FQ775_16655 (polA)
03410 Base excision repair
FQ775_16655 (polA)
03420 Nucleotide excision repair
FQ775_16655 (polA)
03440 Homologous recombination
FQ775_16655 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
niy03032
]
FQ775_16655 (polA)
03400 DNA repair and recombination proteins [BR:
niy03400
]
FQ775_16655 (polA)
Enzymes [BR:
niy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FQ775_16655 (polA)
DNA replication proteins [BR:
niy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FQ775_16655 (polA)
DNA repair and recombination proteins [BR:
niy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FQ775_16655 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FQ775_16655 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH_2
IMS_HHH
HHH
Taq-exonuc
Transposase_20
DprA_N
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
QDZ01875
UniProt:
A0A5B8L1P2
LinkDB
All DBs
Position
3879644..3882574
Genome browser
AA seq
976 aa
AA seq
DB search
MKKGDHLFLVDGSGYIFRAYHALPPLTRKSDGLPVGAVSGFCNMLWKLLQDARNTDVGVT
PTHFAVIFDYSSKTFRSEIFPEYKANRSEPPEDLVPQFGLIREATRAFDLPCIELEGYEA
DDLIATYARLAREAGGDATIVSSDKDLMQLVGDAVSMYDPMKDREIRVPEVIEKWGVPPE
KMIDLQALTGDSVDNVPGIPGIGPKTAAQLLEEFGDLDTLLARAGEIKQNKRRENIIENA
DKARISRELVRLKDDAPVVEGLADFVLRPPDGPKLIAFCKAMEFSSLTRRVAEATGADPS
GIAATALEIEAGAAAHGPDVGAGKAAAKALGGPTRPDTGNVYATPAELAGKRAEMAGAIP
FDRSGYETIVDIKTLDAWIAEAREAGVVAIDTESTSIDPMQADLTGISLAVAPGRAAYLP
LGHKSRDGDLLGGGLVEGQVSLRAALDALAPLFSDPGVLKVGQNIKHDWLLLLQHGVAVT
PVDDTMLISYVLDAGLGAQGLEALSERWLGHAPMPLKEITGSGRNQLRFETVEIADATPY
AGEGADVALRLWQVLKPRLAADGLVSVYERLERPLVEVIGRMEQRGIAVDRQILSRLSGD
FSQTAAAIEEEIYETAGERFNIGSPKQLGDILFGKMGLSGARKTATGQWSTSAQILEDLA
AEGHELPRKIVDWRQVTKLKSTYTDALPGYINPETKRVHTSYALASTSTGRLSSSEPNLQ
NIPIRTVEGRKIRTAFIAEPGNRLISADYSQIELRVLAHIADIPQLRQAFADGVDIHAMT
ASEMFNMPVEDMPPDVRRRAKAINFGIIYGISAFGLANQLSIPREEASAYIKKYFERFPG
IRDYMDRTKEHAREKGYVETIFGRRAHYPEIRSSNPHHRAFNERAAINAPIQGSAADIIR
RAMVRMDGALADAGLAEVRMLLQVHDELIFEAREADVDKAIPVIREVMENAAMPAISMAV
PLQVDARAADNWDEAH
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcatctcttcctcgtcgacggctccggctacatctttcgcgcctat
cacgcgctgccgccactgacgcgcaagtcggacggcctgccggtcggcgcggtctccggc
ttctgcaacatgctgtggaagctgcttcaggacgcccgcaacacggacgtcggcgttacg
ccgacccatttcgccgtcatcttcgattattcctcgaagacgtttcgcagcgagatcttc
cccgaatacaaggccaaccgctcggagccgcctgaagatctggtgccgcagttcggactg
atccgcgaggcgacgcgcgccttcgacctgccctgcatcgagctggaaggttacgaggcc
gacgacctgatcgccacctatgcgcggctggcccgcgaggcaggcggcgacgccaccatc
gtgtcgtccgacaaggacctgatgcagctcgtgggcgatgccgtgtcgatgtacgacccg
atgaaggatcgtgagatccgggtgccggaagtgatcgagaaatggggcgtgccgccggaa
aagatgatcgatctgcaggccttgaccggcgattcggtcgacaacgtacccggcatacct
ggtatcggcccgaagacggcggcgcaactgctcgaggagttcggcgatctcgacaccctt
ctggcgcgtgctggcgagatcaagcagaacaagcggcgcgaaaacatcatcgagaatgcc
gacaaggcgcgcatctcgcgtgaactggtccggctcaaggacgacgcgccggtggtcgag
ggccttgccgacttcgtactgaggccgcccgacgggccgaagctgatcgccttctgcaag
gccatggaattttcgagcctgacgcgacgggtggcggaggcgaccggcgccgatccgagc
ggcatagcggcgacggcactggagatcgaggccggcgcggccgctcacgggccggacgtc
ggggccggcaaggccgccgccaaggctctcggcggaccgaccagaccggacacgggcaat
gtttatgcgacgcccgccgagcttgccgggaaacgcgccgagatggccggcgcgatacct
ttcgaccgttctggctacgaaacgatcgtcgatatcaagacgctggacgcgtggattgcc
gaagcgcgagaagccggcgtcgtggccatcgacaccgaatcgacctcgatcgacccgatg
caggcggatctgaccggcatctcgctcgccgttgcgccgggccgcgccgcttatctgccg
ctcggccacaagtcgcgcgacggcgatcttctcggcggcggccttgtcgaggggcaggtc
tctctgcgcgccgccctggatgcgctggcgccgctgttctccgacccaggggtgctcaag
gtcggccagaacatcaagcatgactggctgcttctgcttcagcacggggtcgccgtgacg
ccggtcgacgacaccatgctgatctcctacgtactggatgccggcctcggggcgcagggc
cttgaagcgctgtcggaacgctggctcggacacgcacccatgccgctcaaggaaatcacc
ggctccggccgcaaccagcttcggttcgaaaccgtcgagatagccgacgccacgccctat
gcgggcgaaggagccgacgtcgcgctgaggctctggcaggtgttgaagccgcggctggcc
gcggacggtctggtcagtgtttatgagcgtctcgagcgtccgctcgtcgaggtgatcggc
cgcatggagcagcgcgggatcgccgtcgaccgccagatactctcgcggctttccggtgac
ttctcgcagacggcggcggctatcgaggaggagatctacgagaccgccggcgagcgcttt
aatatcggctccccgaaacaactcggcgacatccttttcggcaagatgggcctttccggt
gcacgcaagacggcgaccgggcaatggtcgacctcggcgcaaattttggaggatctcgcc
gccgagggccacgaactgccgcgcaagatcgtcgactggcgccaggtgaccaagctgaaa
tccacttataccgacgcgctgcccggctacatcaacccggaaaccaaacgggtgcacacg
tcctatgcgcttgcctcgacctcgaccggacgcctttcgtcatcggagccgaacctgcag
aacatcccgatccggacggtcgaagggcggaagatccgcaccgccttcatcgccgagcca
ggcaacaggctgatctccgccgactacagccagatcgagttgcgggtgctggcgcacatc
gccgatattccgcagctcaggcaggccttcgccgatggcgtcgacatccatgccatgacc
gcctcggagatgttcaacatgccggtcgaggacatgccgccagacgtcaggcggcgggcc
aaggcgatcaatttcggcatcatctacggcatctcggcgttcggacttgcgaaccagctt
tcgatcccgcgcgaggaggcgagcgcctacatcaagaaatacttcgagcgcttccccggt
atccgcgactacatggaccggaccaaggaacacgcgcgcgaaaaaggttatgtcgagacc
atcttcggccggcgggcgcactaccccgaaatccgttcgtccaacccgcatcatcgcgct
ttcaacgagcgtgccgccatcaacgcaccgatccagggctcggcggccgacatcatccgc
cgtgccatggtgcgcatggatggggcactcgccgatgcgggcctagccgaggtgcggatg
ctgctgcaggtgcatgacgagttgatcttcgaagcgcgcgaggcggacgtcgacaaggcg
attccggtgatccgagaggtcatggagaacgcggcgatgcccgcgatctcgatggctgtg
ccgctgcaggtcgatgcccgcgccgccgacaactgggacgaggcacactga
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