Nitrosospira sp. NRS527: NNRS527_00004
Help
Entry
NNRS527_00004 CDS
T08467
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
niz
Nitrosospira sp. NRS527
Pathway
niz00260
Glycine, serine and threonine metabolism
niz00460
Cyanoamino acid metabolism
niz00630
Glyoxylate and dicarboxylate metabolism
niz00670
One carbon pool by folate
niz00680
Methane metabolism
niz01100
Metabolic pathways
niz01110
Biosynthesis of secondary metabolites
niz01120
Microbial metabolism in diverse environments
niz01200
Carbon metabolism
niz01230
Biosynthesis of amino acids
niz01240
Biosynthesis of cofactors
niz04981
Folate transport and metabolism
Module
niz_M00346
Formaldehyde assimilation, serine pathway
Brite
KEGG Orthology (KO) [BR:
niz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NNRS527_00004
09102 Energy metabolism
00680 Methane metabolism
NNRS527_00004
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NNRS527_00004
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NNRS527_00004
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NNRS527_00004
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NNRS527_00004
Enzymes [BR:
niz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NNRS527_00004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
Beta-prop_WDR5
Phage_capsid
Motif
Other DBs
NCBI-ProteinID:
BCT66445
LinkDB
All DBs
Position
5380..6636
Genome browser
AA seq
418 aa
AA seq
DB search
MLSPKLTLEKVDPDLWQAIKGEVQRQEEYIELIASENYASPAVMQAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRLKALFGAEYVNVQPHSGSQANAAVYLTALKPGDTLLGMS
LAHGGHLTHGASVNLSGKIFNAVSYGLDPKTEELDYDEVARLAHEHKPKMIVAGASAYAL
VIDWKRFRKIADEVGAYLFVDMAHYAGLVAAGFYPNPVGIADFVTSTTHKTLRGPRGGVI
LARPEHEKALNSAIFPQTQGGPLMHVIAAKAVAFKEAASKEFKDYQEQVIDNARVMAKVL
QERGLRIVSGRTDCHMFLVDLRAKYITGKLAAESLERAHITVNKNAIPNDPQKPFVTSGI
RIGSPAITTRGFTEIEAEQLANLIADVLDAPTDVAVISQVAEQAKALCAKFPVYGTNC
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccccgaaactgaccctggaaaaggtcgaccccgatctctggcaagcaataaaa
ggtgaagtacaacgccaggaagaatatatcgagttgatcgcctcggaaaattatgccagc
cctgcagtgatgcaagcgcagggatcggtgctgacgaataaatatgctgaaggttatccc
ggcaagcggtactacggcggctgtgaatatgtagatgttgtggagcagcttgcgatagac
cggctgaaagcattgtttggtgcggagtacgtcaacgttcagccgcattccggttcacaa
gccaatgccgcggtatatttaacggcattgaagcccggggatacgctgctcggcatgtcg
ctcgcccatggcggtcatttgacgcatggcgcctcagtcaacctcagcggaaaaatattc
aacgctgtttcatacggactcgatcctaaaaccgaagagctcgattacgacgaggtggcc
cgcctggcgcacgaacacaagcccaaaatgattgtagcgggggcttccgcctatgcgctg
gttatagattggaaacgctttcgtaaaattgctgatgaagtaggcgcttacctgttcgta
gacatggctcactacgccgggttggtggcggcagggttttatcctaatcccgtcggtatt
gccgattttgtcaccagcactacgcacaagacgttacgcgggccgcgcggcggcgtgatc
ctggctaggccagagcacgagaaagcgctgaattccgcaatttttccccagacccaaggg
gggccgttaatgcacgtgattgcggccaaggcggtagcgtttaaagaagccgcgagtaaa
gagttcaaggattaccaggaacaggtgatcgacaacgcgcgcgtaatggccaaggtgttg
caggagcgcggactgcgcattgtatcgggacgcactgactgccacatgtttctggtggac
cttcgtgccaagtatattacaggcaagctggcggcggaatctttggagcgggcgcacatt
accgtcaacaagaatgccattcccaacgatccgcagaaaccttttgtcaccagcggaatc
cgtattggttcgcctgcgatcaccacgcgcggttttacggaaatagaagcggaacaattg
gcaaacctgatcgccgatgtgctggacgcgcctacggatgtcgcggtgatttcgcaagtg
gcggaacaggcaaaagcactctgtgcaaaattcccggtatacggaacaaactgctga
DBGET
integrated database retrieval system