Nitrosospira sp. NRS527: NNRS527_00146
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Entry
NNRS527_00146 CDS
T08467
Name
(GenBank) ATP-dependent RNA helicase RhlB
Organism
niz
Nitrosospira sp. NRS527
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
BCT66582
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Position
144108..146135
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AA seq
675 aa
AA seq
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MIDNFALHRIAQSAGLEISEDISFPARAAKFSSIPSGLHSDVEKHIQTLYPLGLYAHQAK
AIESGLTGRNVCIATSTASGKTLAFTSIAVSHLLVSKGRAILVLYPAKALLRDQERKWKE
ATNRTGLRLVIIDGGVEVSQRTALLAQSQIVLMTPDVLHAWLMSKLGQTEIRKFLASLYM
VILDEAHIYDGIFGTNMAYLLRRLQAASGVTNFLASSATIGDPVGFLHKLTGMEFDLIAG
NDDGAAAPEKTVMLCRVPIKKTPKFLSGLMLEFASNEHGRFLLFADSRKRVEELAAEMSR
LLLKSDEQPNDNTIDEDIDLGDSLVKIDEQRVLPYRAGYEEEDRDRIQKALTSGTLLGVI
TTSALELGIDIGDIELVVMLGEPPSVKSFWQRAGRAGRQNVGKVVLLDLDGRITSMGLQR
YLDRMPEPNWLYLDNEYLQYANALCAAEEQQQTPQMLYSRKPFATVPATFSELLDNELVP
TRSIPHDLYPLKQQAIGSPHRAFPLRSGIEKSYKVICRHLPNQGLGTLSYSQVLREAFPG
AIYRYLASPYRVFQLNHARGEINTTRTKGIGRTTPVVQTAVFPQFTDQMYYVRMSAEAFI
TECRVQVSERVIGFIEQYGQNKNEVSYGPGNTYSQKPLNRYIDTTGVCFYFPEENLQREQ
LGKYICLAFCKVCSV
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacaatttcgctcttcatcgcattgctcaaagtgctggcctagaaatcagcgaa
gatatttcctttcctgccagggctgccaagttttcaagtattccctccggtttgcactct
gatgtcgaaaagcacattcaaacgctatatccgctcgggttatatgcgcatcaagcgaaa
gcaatcgagtcggggcttactggacgaaacgtgtgtattgctacgtccactgcttccggt
aaaacgctcgcttttacgtcaatagcggtttcgcacctcttggtatcgaaaggcagggcc
attcttgtgctttatccggccaaagcactcctacgcgaccaagaaagaaagtggaaggaa
gcgaccaatagaaccggcctaagattagtgatcattgatggcggtgttgaggtttcgcag
aggacagcgcttctcgctcaatcacagatagttctcatgactccggacgtgcttcacgca
tggctaatgtcaaagcttggccaaacagaaatacgcaagtttttggcctcgctatatatg
gtcattcttgatgaagcgcacatctacgatggcatctttggcactaatatggcgtatttg
cttcgccggcttcaagccgcaagcggcgtaactaactttctagccagttccgccacaatt
ggagatcctgtcggctttcttcacaaattaacgggtatggaatttgatctgattgccggg
aatgatgatggcgcggccgcgccggaaaagaccgtcatgttatgtagagttccaataaaa
aaaacaccaaagttcctaagcggattaatgctggaattcgcttcaaacgaacatggccga
ttcctcctttttgccgattctcgcaaaagagtcgaagaacttgcagccgagatgagccgc
ctacttctaaaatccgatgaacaaccaaacgataacacaatcgacgaagatattgatctt
ggggactcactggtcaaaatagacgagcaaagggtactgccctaccgtgcaggctatgaa
gaagaagatcgtgaccgaatccaaaaggcgttaaccagtggaaccctgctgggggtaata
accactagcgcgttagagcttggaatagacattggtgacattgagttagtggtcatgctt
ggcgaaccgccatctgtaaaatctttctggcaaagggcagggcgagcaggtcggcaaaac
gtgggaaaagtcgtcctgctcgatttagatggacgcatcacctctatgggattgcagcgc
tatcttgatcgtatgccggaaccaaactggctctatttggacaatgaatatcttcagtac
gcgaatgcactttgcgctgccgaagaacaacagcaaacaccacagatgctttattccaga
aagccattcgcgacggtgcccgctacattttcagaactccttgacaatgaacttgtacct
acgcgttctattcctcatgacctctatccgttaaagcagcaggctattggcagcccgcat
cgtgcgtttcccctccgcagcggtattgagaaatcctacaaagttatttgtcgccatctg
ccaaatcagggattagggactttgagctattctcaagtactacgagaggcatttccagga
gcgatctatcgttaccttgccagcccttaccgagtattccaactgaatcacgcaagagga
gaaatcaatacaaccagaacgaagggaatcggacgcactactccggtcgtgcaaaccgct
gtgttcccacagtttacggatcagatgtattacgttcggatgtctgctgaggcatttatt
actgaatgtcgcgttcaggtttcggagagagtcattggatttattgaacagtacggacag
aataagaacgaagtatcctacggaccgggtaatacctattcacaaaaacccctaaatcgc
tacatcgacacgactggcgtatgtttctattttcccgaagagaacttacagcgggaacaa
ttaggaaaatatatctgtcttgctttttgtaaggtgtgctccgtttaa
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