Nitrosospira sp. NRS527: NNRS527_00557
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Entry
NNRS527_00557 CDS
T08467
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
niz
Nitrosospira sp. NRS527
Pathway
niz03420
Nucleotide excision repair
niz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
niz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NNRS527_00557
03430 Mismatch repair
NNRS527_00557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
niz03400
]
NNRS527_00557
Enzymes [BR:
niz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NNRS527_00557
DNA repair and recombination proteins [BR:
niz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NNRS527_00557
MMR (mismatch excision repair)
Other MMR factors
NNRS527_00557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_11
Complex1_LYR_1
Motif
Other DBs
NCBI-ProteinID:
BCT66982
LinkDB
All DBs
Position
586535..588784
Genome browser
AA seq
749 aa
AA seq
DB search
MPSPSLSALNLSALNPEQREAVTLPHQSALVLAGAGSGKTRVLTTRIVYLIQSSQVSPHG
ILAVTFTNKAAKEMLTRISSMLPINTRGMWIGTFHGLCNRMLRAHHQDAGLPQAFQILDS
ADQLAVIKRILKNLGADDEKFPPRQVQWFINNAKDGGLRASQVETYDDFARKAVEFYLSY
EQQCNKEGVVDFAELLLRSYELLSRNEIVREHYRSRFRHILVDEFQDTSRLQYRWLRLLA
GEQAAVFAVGDDDQSIYAFRGANTGNMKEFESDFRISKIIKLEQNYRSHGNILDAANTLI
RNNSGRLGKNLWTSEGHGEPIRVYNAPNDFDEAAFIVGEAKSLRAEGVSLSQMALLYRSN
AQSRVLEHALFNASLPYRVYGGMRFFERQEIKHALAYLRLLVNLGDDNALLRIVNFPARG
IGMRSLEQLQDEAERQGGSLWEAMIEKCGGGALSLPEAEDKNPARPEGGKGPEKSKKGIG
GFVAMIESMRQVCEKLPLPEVVEHVLEHSGLVAHYRAEREGADRLENLNELVTAAASFVH
EAEDDSLTVFLAHASLEAGEHQAGGGEDALQLMTVHSAKGLEFHSVFMSGLEEGLFPHDN
SRNEAAGLEEERRLMYVALTRARRRLYLSFAQSRMLHGQTRYNVPSRFLQEIPDNLLKWL
QPLQKTGIRNHEPGSGDYGHGYGKAIQQPVRHDSPASPWRVGQNVVHAKFGAGVIVNCEG
SGADARVEVKFSRAGTKWLLLEYAKLVGA
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgccttctccttctctttccgcactgaatctttccgcactgaatcctgaacaacgcgaa
gcggtcactttgccgcaccagtcggcattggtgttggcgggtgcgggtagcggcaagaca
cgggtactcactacgcgcattgtttatttgatccagtccagccaggtgagtcctcacggc
atactggccgtcactttcaccaacaaggcggcgaaggaaatgcttacccgcatttcttca
atgctgccgatcaatacgcgcggtatgtggataggcacgttccacggcctgtgcaatcgc
atgcttcgcgcccatcatcaggatgccggattgccgcaggcttttcagattctggattcc
gccgatcaactggcggtaatcaagcgcatcctgaagaatctgggtgcggatgacgaaaaa
tttccgccgcggcaggtccaatggttcatcaacaacgcaaaagatggggggttgagggcg
tcgcaggttgaaacctatgacgattttgcgcgtaaggcggtcgagttttacctttcttac
gagcagcaatgcaataaggaaggcgtggttgactttgctgagctgctgctgcgcagttac
gagctgctgagccggaatgaaatcgttcgcgaacattatcgcagccgcttccgccatatt
ctggtggatgaatttcaggacacgagccgtctgcaatacagatggttaaggctgcttgcc
ggcgaacaggctgctgtatttgccgttggagatgacgaccagagtatctatgcatttcgt
ggcgccaacaccggcaatatgaaggagtttgaaagcgattttcgtatttcgaaaatcatc
aagctggagcagaactatcgctcgcacggcaatatactggatgccgccaacacgctgata
cgcaacaatagcggccggctcggcaagaatctgtggacctccgagggccatggcgaaccg
atacgcgtatataacgcgccgaacgatttcgatgaggctgcattcatcgtgggcgaagca
aaatcgctgcgtgcggaaggcgtgtcgctgtcccagatggcattgctctaccgttccaat
gcgcaatccagggtgctggagcacgctttgttcaacgcctcgttgccgtatcgggtctat
ggcggaatgcggtttttcgagcggcaggaaatcaagcatgccctggcgtatctccggcta
ttggtcaacctcggcgacgacaatgcgctgctgaggattgttaactttcctgcgcgcggt
atcggtatgcgaagtttggaacagttacaggacgaagccgagcggcaaggaggaagcctt
tgggaagcaatgatcgagaaatgcggaggtggagcgctttctctaccggaagcggaggat
aaaaaccctgcgagacccgagggtggtaaggggccggagaagtcaaagaaaggaattggt
ggttttgtcgcgatgatcgaatccatgcgccaggtatgcgagaagttgccgctaccggag
gtagtggaacacgtcctggagcatagtgggttagtggcgcattatcgtgccgaacgcgaa
ggagccgatcgactggaaaacttgaatgaattggtcaccgcagccgcgagcttcgtacat
gaggcggaggacgatagcctcacggtatttcttgcccatgcgtcgctggaagcgggcgag
catcaggctggcggtggagaggatgcgctgcagttgatgacagtgcattcggccaagggt
cttgagtttcacagcgtgttcatgagtgggctggaagaaggcctgtttccacatgataac
agtcgtaacgaagcagccggcctggaagaggaacggcggttgatgtatgtcgcgttgact
cgggccaggcgcaggttgtatttgagtttcgcccaaagccgcatgcttcatggccagacc
cgctataacgttccttcgcggtttttgcaggaaattccggataacttgctgaagtggttg
caaccgctgcagaagactggaattcgaaatcacgaaccaggctccggggattacggccat
gggtatggcaaggcaatccagcagcccgtgaggcacgactcaccggcatcgccctggcga
gtaggacagaatgtcgtgcatgccaagtttggcgcgggtgtaatcgtcaattgcgaagga
agcggcgcggacgctcgtgtcgaggtcaagttcagccgtgccggcacaaagtggttattg
ctggagtatgcaaaactggtcggtgcgtaa
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