Nitrosospira sp. NRS527: NNRS527_00812
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Entry
NNRS527_00812 CDS
T08467
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
niz
Nitrosospira sp. NRS527
Pathway
niz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
niz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NNRS527_00812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
niz03021
]
NNRS527_00812
03400 DNA repair and recombination proteins [BR:
niz03400
]
NNRS527_00812
Enzymes [BR:
niz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NNRS527_00812
Transcription machinery [BR:
niz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NNRS527_00812
DNA repair and recombination proteins [BR:
niz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NNRS527_00812
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
BCT67230
LinkDB
All DBs
Position
857160..858164
Genome browser
AA seq
334 aa
AA seq
DB search
MPSNTFLTPRIIDVQNISPLHAKIIMEPFERGYGHTLGNALRRILLSSMPGFAPTEVQIS
GVVHEYSALDGVQEDVVDILLNLKGIVLKLHSRTEAILILKKKGEGTVTAGDIEAGHDVE
IINPDHVVAHLTAGGKLDMQIKVELGRGYVPGTVRQLTSEGRALGSILLDASFSPVRRVS
YAVESARVEQRTDLDKLVMDIETNGVVDPEEAIRYAAKVLVEQLSIFADLKGTPLPVEQP
KLPQIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTETELLKTPNLGRKSLNEIK
EVLASRGLTLGMKLESWPPSNLDKGKKETSHAAP
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgccaagtaacacttttcttacgccccgcattattgacgtgcagaatatttccccgctg
catgccaaaattatcatggaaccgtttgaacgtgggtacggacacacgttgggaaatgcg
ttacgtcgaattttgttatcgtccatgccgggattcgcaccaaccgaggttcagattagc
ggtgtagtgcatgagtattctgcgctggatggtgtacaagaggatgtggtcgatattctg
ctcaatctcaagggtatcgttttaaagctgcacagccgaaccgaggccattctgatcctc
aaaaagaaaggtgaaggtacggtcactgccggcgacatcgaggcgggacatgatgtggag
atcattaatccagatcatgtggtggcacaccttactgccggcgggaagctggatatgcaa
atcaaggttgaacttgggcgcggttatgtacctggaaccgtgcggcaattgacaagtgaa
gggcgtgctcttggcagtattttgctggatgcatctttcagtccggtgcggcgcgtaagt
tatgcggtggagagtgctcgggttgagcagcgtaccgacctcgacaagctcgttatggat
attgaaaccaacggcgttgtcgatccagaggaagcaatccgttatgcagcgaaggtactg
gttgagcaactctccatatttgccgacctgaagggcacgccgttaccggtggagcagcca
aaattgccccagatcgatccagtattacttcgaccggtggatgatttggagcttaccgtg
cgctcggccaattgcctgaaagcggagaatatctattatattggcgacctgattcagcgc
acagaaacggaattgctgaaaacccccaatttgggaagaaaatctctcaatgaaataaag
gaggtattggcgtcccgcgggttgacgctgggcatgaagctggaaagttggccgccttcc
aatcttgataagggaaaaaaggaaacaagtcatgcggcaccataa
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