Nitrosospira sp. NRS527: NNRS527_01223
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Entry
NNRS527_01223 CDS
T08467
Name
(GenBank) Non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
niz
Nitrosospira sp. NRS527
Pathway
niz03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
niz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NNRS527_01223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
niz03400
]
NNRS527_01223
DNA repair and recombination proteins [BR:
niz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
NNRS527_01223
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
BCT67636
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All DBs
Position
1297494..1298405
Genome browser
AA seq
303 aa
AA seq
DB search
MDIPKASGRALWKGAISFGLVHIPVALHSATAEQGLDFDWLDKRSMDPVGYKRINKKTGK
EVDKENIVKGIEYEDGQYVVLSQDEISAAYPKATQTIEIEMFVPATDIPFVYLERPYYVV
PINKGAKVYALLRETLLNTRRIGIARVVIQTKQHLAALMPSGPALVLNLLRWGDEIRSWE
KLSFPPEGKEEAGITDKELKMAEQLVMDMSGKWHPEEFRDSFKEEIMKLVHEKVETGDIQ
TVAQPEESETAPGSAQILDLTELLQRSLKKSGDKESSGKARGKKPADADSVPTSTKGTHK
RRA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggatattcctaaggcaagcggccgcgcgttatggaagggcgccataagcttcggcctg
gtgcatatacccgtagccctccattccgcgacggcggaacagggactggatttcgactgg
ctggacaagcgcagcatggatccggttggctacaagcgtataaacaagaagaccggaaag
gaggtcgacaaggaaaatatcgtcaaaggcattgaatatgaagatggtcagtatgtcgtg
ctgagtcaggacgaaatctctgctgcgtatccgaaggccactcaaactatcgagatcgaa
atgtttgtaccggccaccgatattccattcgtttatcttgagcgcccttactatgtcgtt
ccgatcaataaaggagccaaggtctatgcgctcttgcgcgaaacccttctcaatacccgg
cgcatcggtattgcgcgggtggttattcaaacaaagcagcacctggccgctctaatgcca
tcaggtcccgcactcgtgctgaatctgttgcgatggggcgacgagatacgcagttgggag
aaattgagctttcctcccgagggaaaggaggaggcgggcattaccgataaggaattgaaa
atggctgagcaattggtgatggacatgagcggaaaatggcatcctgaagagttccgcgat
tctttcaaggaggaaatcatgaaactcgtccatgaaaaagtcgaaacgggcgacatacag
accgtggctcaaccagaggaatccgaaacggcacctggcagtgcgcagatacttgatctt
accgaattgctgcagcgcagcctgaagaaaagtggggacaaggagagtagcggcaaggcg
cggggcaaaaaaccggcggatgcagacagtgtacccacttctaccaaaggtacgcataag
cgccgcgcatag
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