Nitrosospira sp. NRS527: NNRS527_02215
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Entry
NNRS527_02215 CDS
T08467
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
niz
Nitrosospira sp. NRS527
Brite
KEGG Orthology (KO) [BR:
niz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
niz03032
]
NNRS527_02215
03036 Chromosome and associated proteins [BR:
niz03036
]
NNRS527_02215
03400 DNA repair and recombination proteins [BR:
niz03400
]
NNRS527_02215
DNA replication proteins [BR:
niz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NNRS527_02215
Chromosome and associated proteins [BR:
niz03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
NNRS527_02215
DNA repair and recombination proteins [BR:
niz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
NNRS527_02215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
TetR_C_30
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
BCT68611
LinkDB
All DBs
Position
complement(2323451..2323735)
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AA seq
94 aa
AA seq
DB search
MTKSELISRLAARYPQLGAKDAELAVKVILDAMAKSLAQGQRIEIRGFGSFDLNYRPPRV
GRNPKSGEKVKVPEKYVPHFKAGKEMRERVDNKT
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagtctgaactgatctcgaggcttgcagcccgttatccgcagttgggcgcgaag
gatgccgagcttgcagtcaaggtgatacttgatgcgatggccaagagtttagcgcaggga
cagcgtattgaaattcgtggattcggcagcttcgatctcaactaccggccgccgcgtgtc
gggcgtaatccgaaatccggagagaaggtcaaggtgccggaaaagtatgttcctcatttc
aaggcggggaaggaaatgcgtgagcgggtcgataacaaaacctga
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