Nitrosospira sp. NRS527: NNRS527_03060
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Entry
NNRS527_03060 CDS
T08467
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
niz
Nitrosospira sp. NRS527
Pathway
niz03030
DNA replication
niz03430
Mismatch repair
niz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
niz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NNRS527_03060
03430 Mismatch repair
NNRS527_03060
03440 Homologous recombination
NNRS527_03060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
niz03032
]
NNRS527_03060
03400 DNA repair and recombination proteins [BR:
niz03400
]
NNRS527_03060
Enzymes [BR:
niz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NNRS527_03060
DNA replication proteins [BR:
niz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NNRS527_03060
DNA repair and recombination proteins [BR:
niz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NNRS527_03060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
BCT69437
LinkDB
All DBs
Position
3226900..3230463
Genome browser
AA seq
1187 aa
AA seq
DB search
MPTSPSFVHLRLHSEFSVVDGIVRIDEAVAKAVADDMPSLALTDLSNLFGLVKFYQEARK
KGIKPIIGCDVWISNESDRDKPGRILLLCQTYQGYLLLCRLLSRAYRENQHRGRPEIRKS
WLKRADAGSGAEGLIALSGAGSGEIGLMLMQNDPDQAEQLAREWAGLFPGRFYIEVQRAG
HPNAEALVQRSLMLASALRLPVVATHPVQFLNPEDYRAHEARVCIAEGYVLGDRRRPKNC
TEEQYFKTQAEMVELFADIPSALANTVALAKRCNLALELGVNRLPLFPTPNNESLELYLR
TQAAAGLEVRLNALFPDAAQRDAEMPKYYARLDFEADVIIQMGFAGYFLIVADFINWAKH
NGVPVGPGRGSGAGSLVAYSLGITDLDPLRYDLLFERFLNPERVSMPDFDIDFCQDGREY
VIEYVKQKYGAESVSQIATFGTMAAKAVVRDVGRVLDLPYSFVDQLAKLVPFEIGMTLKK
AREEEPQLNERAQAEEEVRNLLELAERLEGLTRNVGMHAGGVLIASGKITDFCPVYCTDS
GESVISQLDKDDVEKIGLVKFDFLGLRTLTILDWTVRYIRQRNRDAAEEESASIATDASK
PAAESDIRHSDSFSLENLPLDDAATYALLRQGNAVGVFQFESRGMKDLLQKARPDRFEDI
IALVALYRPGPMALIPEFTERKHGKRVEYLDPRLKPILEPTYGVMVYQEQVMQIAQVIGG
YSLGAADLLRRAMGKKQVEEMALHRDIFVAGATKNGLTQGDAAELFDLMEKFAGYGFNKS
HAAAYALIAFQTAYLKAHYPAEFMAATLSADMDDTDKVNSFFEDSVANGLIMLPPDINLS
DYRFVPVDKKTVRYGLGAIKGTGGSAIAAIIKVRDTGGPFSDLFDFCQRVDKRIVNRRVM
ESLIRAGAFDSVNTHRAGLLASVGIALESAEQADRAVNQVSLFGEADSHTGQLSLINVPP
WPEKEKLKNEKVALGLYLSGHPFHAYAEELKPFVRTRLDRLNSQREPQLLAGIVYAIRTQ
VTRRGRMGVIVLDDGSTRLELVVYNELFESVRAWLKEDQLLIVEARVNGRGGDDEYGSTL
RITADQLYDLNSARTRFAKRMELHCNGLSNAIRLKELLAPHRHSTNNGKSGHAKDDDKLS
CPVRVVYRSQDAICELELDDAWRVRLQDDLLQSLSTHFNAENVRIIY
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgcctacatctccatctttcgttcatttgcgtttgcacagcgagttttccgtggtggat
ggtatcgtgcgaatcgacgaggcagtggcaaaagcggtagcagacgatatgccgtcactg
gcgctgaccgatctttccaatctgttcggcctggtcaagttttaccaggaggcgcgcaag
aagggaataaagccgatcatcggctgcgacgtctggatcagtaatgaatccgatcgggac
aagcccgggcgcatcttgctcttgtgccagacttaccaaggctatctgctgttgtgccgc
cttctgtcgcgcgcctaccgcgaaaaccagcaccgtggacgcccggaaatcaggaaatcc
tggctcaagcgagctgatgcgggaagtggagcggaaggactgatcgcattgtcgggcgca
ggctccggcgaaatcggcctgatgctgatgcagaacgatcctgaccaggcggagcaactg
gctcgagaatgggctggcctttttcccggccgtttttatatcgaagtgcagcgggcaggc
catcccaatgcagaggccctggtgcaacgctcactgatgttggcgtccgccttgcgtttg
cccgtggtggcgacacacccagttcagttcttgaaccccgaagactaccgggcacacgag
gcgcgggtctgtatcgcagaaggctatgtgcttggcgatcgccggcgcccgaagaattgc
accgaggagcaatacttcaaaacccaggctgaaatggtcgaattgttcgccgatatccca
tcggcgctggccaacacggtggcacttgccaagcgctgcaatctcgcgctggaattaggc
gtcaatcgccttccgttgtttcccacccccaataacgagagcctggaactgtatctgcgc
acacaggcagcggcgggtctggaagtgcgcctgaacgcgctttttccggatgccgcccag
cgagacgcggagatgcccaagtattacgcccggcttgatttcgaagctgatgtcatcata
cagatgggtttcgccggttattttctgatcgtcgccgacttcatcaattgggccaagcac
aatggcgtgccggtagggccgggccggggctccggagcaggttcgttagtggcctattcg
ctgggcattaccgacctcgacccgcttcgctatgacctgctattcgagcgttttctcaat
ccggaacgtgtttccatgcctgacttcgatatcgatttctgccaggacggacgcgaatat
gtcatcgaatacgtgaaacagaaatatggcgccgagagcgtttcccagattgccactttc
gggaccatggcggcaaaggcggtggtgcgcgatgttggacgcgtgctggatctgccgtac
agctttgtcgatcagttggcgaagctggtgccgtttgaaatcggtatgaccttgaaaaaa
gcacgtgaagaggagccgcaactgaatgagcgggcgcaggcagaagaagaggtgcgtaat
ctgctggaactggctgaacggcttgaagggctcacccgtaatgtgggcatgcacgccggc
ggtgtactgatcgcatcggggaagatcaccgacttttgccccgtctattgcacagattcg
ggtgagtcggtaataagccagctcgacaaggacgatgtggagaaaatcggactggtgaag
ttcgacttcctgggattgcggaccctgaccatactcgactggaccgtcagatacatcagg
cagcgtaatcgggacgctgcggaagaagaatccgcatccatcgcaaccgatgcgagcaag
cctgctgccgagtcggatatccggcattccgactccttttccctggaaaatctgcccttg
gacgatgcggccacctacgcgctgttgcggcagggcaatgccgtaggcgtgttccagttc
gagtcgcgcggcatgaaggatttgctgcagaaggccaggcccgaccgtttcgaggacatt
atcgcattagtggcattgtaccgtccgggaccgatggcgctgattcccgaatttacggaa
cgcaagcatggcaagcgcgtggaatatctcgatccacggctgaagcccatacttgaaccc
acttatggggtgatggtttaccaggaacaggtgatgcaaatcgcccaggtgataggcgga
tatagcctcggcgccgctgacctgctacgacgggcaatgggtaagaaacaggttgaggaa
atggcgttgcatcgcgatattttcgttgcgggagcgaccaagaacggcttgacccaaggt
gatgcggccgaactcttcgatttgatggagaaattcgcgggttacggattcaataagtcg
catgcggcggcttatgctttgatcgccttccagaccgcctacctcaaggcgcattatccg
gcggagttcatggctgccaccttgtccgccgacatggacgataccgacaaggtgaattcg
ttcttcgaggatagcgtggccaacgggcttatcatgctgccgcccgacattaacctttct
gactatcgctttgttcctgtggacaaaaagaccgttcgctatggtcttggcgcgataaaa
ggaacggggggatcggcgattgcggcgattatcaaggtgcgcgatacgggcgggcccttt
agcgatttgttcgatttctgccaacgggtcgacaagcgaatcgtcaatcgccgcgtgatg
gaatcgctcatccgtgccggcgcctttgattctgtcaatacgcatcgggccggcctgctg
gcctcggtcggtatcgcacttgaatccgccgagcaggcggatcgcgcggtcaatcaggtg
agtctgtttggcgaagccgatagtcacaccgggcaattgagcttgatcaacgtgccgcca
tggccggaaaaggagaagttgaaaaatgagaaggtggcattaggcctctatttgagcggg
cacccttttcacgcgtatgcggaagaactgaaaccatttgtacgcacccgcctggatcga
ttgaactcccagcgggagccacagctattggcgggaatcgtctacgctatacgcacacag
gtgacccgccggggcagaatgggcgtgattgtattggacgacggcagcacgcggttagag
ttggtcgtgtacaacgaattattcgagtctgtgcgggcatggctgaaagaggatcaactg
ctgatcgttgaggccagagtgaacggcagaggcggcgatgacgaatatggcagcacactg
cgcattaccgccgaccagttgtatgacctgaacagcgctcgcactcgcttcgccaagcgt
atggagcttcattgcaacggactctcgaatgccataagactaaaagaattgcttgcgccc
catcgtcacagcacaaataacggcaaatccggtcatgcgaaagacgatgataaattatcc
tgccccgtgcgagtcgtttatcgcagccaggacgccatttgcgaacttgaactggacgat
gcctggcgggtacgccttcaggatgatctcctgcagtctctatcaacgcatttcaatgcg
gagaatgtcagaatcatttactga
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