Nitrosospira sp. NRS527: NNRS527_03072
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Entry
NNRS527_03072 CDS
T08467
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
niz
Nitrosospira sp. NRS527
Brite
KEGG Orthology (KO) [BR:
niz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
niz03021
]
NNRS527_03072
Transcription machinery [BR:
niz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NNRS527_03072
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Rho_N
UCR_14kD
HTH_31
KORA
HTH_25
Motif
Other DBs
NCBI-ProteinID:
BCT69449
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Position
3239509..3240354
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AA seq
281 aa
AA seq
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MNFALAIPSTGSIESYIQSANRFGILSQEEEIRLARSLRDEDNIDAARQLVLSHLRVVVA
IARGYKGYGLPQADLIQEGNIGLMKAVKRYDPERGVRLVSFAVHWIKAEIHEFILRNWRL
VRIATTKAQRKLFFNLRSMKSVLDTMNPEEVNAMAKQLGVKVEEVVEMETRFSGRDISLE
PLSDDDDDEAFSPIAYLTDGSEPRQLLEAEENTRLRGEGLEQALSGLDARSRRIIEARWL
REKDPATLHDLAGELGVSAERIRQIEAKAMQKMRTALAPGA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcgctttagccataccttcaaccggcagcatcgaaagctacatccagtctgcc
aatcgcttcggaattctttctcaggaagaagagattcgcttggcgcgatccctgagggat
gaagataacatcgacgctgcccgccaactggtgttgtcgcacttgcgcgtagtggtcgcc
atcgctcgcggctataaagggtatggtctgccccaggccgacctgattcaagaaggcaac
attggcctcatgaaagcggtaaaacgctatgatcccgaacgcggcgtgagactggtatcg
tttgcggtgcactggatcaaggctgaaatccacgaattcatactgcgtaactggcggttg
gtgagaattgccaccacgaaagcgcagcgtaagctgttctttaacctgcgcagcatgaag
tcggtgctggacaccatgaatccggaagaggtcaatgcaatggccaagcagttgggggtc
aaggtcgaggaagtggtggaaatggagacccgcttcagcggaagagatatttcgctcgag
cctttatccgatgacgatgacgatgaagcattcagccccatcgcttatcttaccgatggc
tcagaacctcggcagttgctggaagctgaagagaacacgcgcctgcgcggggaaggcctg
gagcaggcgctatccggcctggacgctcgcagccgacgcatcattgaagcccgctggctg
cgggaaaaagatcccgcgaccctgcatgatcttgctggcgaattgggcgtgtctgcggag
cgaatccgccagattgaagccaaagccatgcagaaaatgcgtaccgccttggcccctggc
gcgtaa
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