Nitrospira japonica: NSJP_0014
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Entry
NSJP_0014 CDS
T05001
Symbol
msbA
Name
(GenBank) fused lipid transporter subunits of ABC superfamily: membrane component; ATP-binding component
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
nja
Nitrospira japonica
Pathway
nja02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NSJP_0014 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nja02000
]
NSJP_0014 (msbA)
Enzymes [BR:
nja01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
NSJP_0014 (msbA)
Transporters [BR:
nja02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NSJP_0014 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
AAA_30
AAA_29
Zeta_toxin
AAA_28
RsgA_GTPase
AAA_25
DUF3584
DUF87
DEAD
nSTAND3
HUTI_composite_bact
DUF4220
AAA_18
NACHT
MobB
P-loop_TraG
nSTAND1
DUF6057
AAA_23
Motif
Other DBs
NCBI-ProteinID:
SLM46186
UniProt:
A0A1W1HZK8
LinkDB
All DBs
Position
I:complement(13443..15185)
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AA seq
580 aa
AA seq
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MSGLDRFMRLVRYLKPYRLRLVAAFVCSALVAVFSGAYAWLVKPVLDEIFINKNEGLLLA
LPLALFIVSVLKSAFNYGQNYLMNYVGNQVITDIRQELFGKMIRLPVGYHDANTSGRLVS
RVVNDVTLMANAVAGVLKDIFQQGLTFLAMLGVIFYQNWQLAGLSIVVIPLAVVTTVRMG
KRLRALAASGQERMGDMASTLQETLAGIRMVKAYGREEAEAQRFKDSNRAFLNTTMKAIQ
VSSLGSSHMEVIGVVGVAAIVWYGGYLVINGAMTPGSFFSFLTAMFMAYTPIRRLSGSNN
TIQQALAAAERVFGVIDLKTEQEIERGSLVLPPIGQSVAYQDVTFHYESQSVPALNGIDL
TIRAGEMVAIVGSSGSGKTTLVNLLPRFYEPTAGHILIDGIDIQSYTLASLRAQIGIVSQ
DVVLFDDSVRANIAFGRRDATDEQIEQAARQAYAHDFIERLPQSYRTVVGEKGVKLSGGE
RQRLAIARAILRDPPLLILDEATSALDTESERVVQLALTNLMQNRTTVVIAHRLSTIQRA
DRIVVLSRGRIVEVGTHEELLRHGGHYQRLHAMQFQDVSQ
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtctagaccggttcatgcgattggtccggtatctcaagccgtaccggctgcgg
ctggtcgcggcgttcgtctgttccgccctcgtggcggtgttttccggcgcctacgcctgg
ctggtgaaaccggtgctggacgagatcttcatcaacaagaacgaggggcttctgctcgcg
ttgccgctcgcgctcttcatcgtgtcggtcctcaagagcgcgttcaactacggccagaac
tacctcatgaactatgtcggcaaccaggtcatcaccgacatccgccaggaactcttcggg
aagatgatccgcctgccggtcggctatcacgatgcgaatacgtccggtcggctcgtctcg
cgcgtcgtcaacgacgtcacgctcatggccaacgcggtggccggtgttctaaaggatatc
ttccagcaggggctcaccttcctcgccatgctcggcgtgatcttctatcagaattggcag
cttgcggggctgtcgatcgtcgtcattccgctcgccgtcgtgaccacggtgcgcatgggc
aagcggttgcgcgcgctcgcggccagcgggcaagagcggatgggcgacatggcctccacg
ctgcaggagacgctggccggcatccgcatggtgaaggcctacggtcgtgaagaggcggag
gcgcaacggttcaaggacagcaaccgggcgttcctgaacacgacgatgaaggccatccag
gtgtcgtcgctcggctcgtcgcacatggaagtgatcggcgtggtcggcgtcgcggccatc
gtctggtatggcggctatctcgtcatcaacggcgccatgacgcccgggtcgttcttttcc
tttctgacggcgatgttcatggcctacacgccgatccggaggttgtccgggtccaacaat
acgattcagcaggcgctggcggcggccgagcgggtcttcggcgtcatcgatctcaaaacc
gaacaggaaatcgagcgcgggagtctcgtgctgccgccgatcggccagtcggtcgcgtat
caggacgtgacgttccattacgagagccagagcgtgccggctctcaacggcatcgacctg
accatccgcgccggtgagatggtcgccatcgtcggcagcagcgggagcggcaagaccacg
ctcgtgaatctgctgccccgcttctatgaacccacggccggccacatcctcatcgacggc
atcgacatccagtcctacacgctggcgtcgcttcgcgcgcagatcggcatcgtgtcgcag
gacgtcgtcctgttcgacgattccgtccgcgccaacatcgcgttcggccggcgggacgcc
accgacgagcagatcgagcaggcggccaggcaggcctacgcccacgatttcatcgagcgg
ctgccgcagagttatcgcacggtggtcggagagaaaggcgtcaagctctcgggcggcgag
cggcagcggctggccatcgcccgcgcgattctcagagatcctcccttgttgattctggac
gaggcgacgtccgccctcgacacggaatcggagcgcgtcgtccaactcgccctcacgaac
ctcatgcaaaaccgcacgaccgtcgtgatcgcgcaccggctgtccactatccagcgcgcg
gaccgtatcgtcgtgctcagccggggcaggatcgtcgaggtcggcacccatgaagaactg
ctgcgccacggaggccactatcaacggctgcacgcgatgcagttccaggacgtgtcccaa
tga
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