Nitrospira japonica: NSJP_0062
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Entry
NSJP_0062 CDS
T05001
Symbol
ffh
Name
(GenBank) Signal Recognition Particle (SRP) component with 4.5S RNA (ffs)
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
nja
Nitrospira japonica
Pathway
nja02024
Quorum sensing
nja03060
Protein export
nja03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
NSJP_0062 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NSJP_0062 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NSJP_0062 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
nja02044
]
NSJP_0062 (ffh)
Enzymes [BR:
nja01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
NSJP_0062 (ffh)
Secretion system [BR:
nja02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
NSJP_0062 (ffh)
Eukaryotic Sec-SRP protein
NSJP_0062 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
MeaB
AAA_22
AAA_30
AAA_31
Zeta_toxin
ATP_bind_1
Fer4_NifH
Thymidylate_kin
AAA_33
MobB
6PF2K
AAA_16
ArsA_ATPase
APS_kinase
ResIII
ABC_tran
AAA_18
nSTAND3
AAA_19
Motif
Other DBs
NCBI-ProteinID:
SLM46234
UniProt:
A0A1W1HZS0
LinkDB
All DBs
Position
I:complement(56647..57993)
Genome browser
AA seq
448 aa
AA seq
DB search
MLDALSEKFEKILKKLRGSGVLTEQNIAEAMKEVRLALLEADVNFKIVKDFVERVGKKAV
GQEVMQSLTPGHQVVKVVWDELRAMMGGEKAGLALSSAPPTVVMMVGLQGAGKTTTCGKL
ARFFKQQGRRVLLVAADPRRPAAGDQLASLGRDLQIDVHRQDQAGASQTDVVRICQDGVR
RGTDQGFDVVVLDTGGRLHVDDELMGELVAVKAAVKPHEVLLVADAMTGQDAVNMATQFH
ERVGVTGIILTKVEGDARGGAVLSIRAVTGQPIKFLGVGEKLDALELFHPDRMASRILGM
GDVLSLIEKAQETFTREQAEEAQKRLTSNTFTLEDFRAQLAQVNKLGSLDQILGMLPGGQ
KLRGAMEGQVPEREMKRVVAIIDSMTRRERRDHTLINGSRKKRIARGSGTNVMEVNRLIK
QFLSARKLAKMLTGASGRRQLAQLLNSR
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacgcgctcagcgaaaaattcgaaaaaatcctgaagaagctccgcggctccggt
gtactcaccgagcagaacatcgcggaagccatgaaggaagtccgcctggccttgctcgag
gcggacgtgaatttcaagatcgtcaaagacttcgtcgaacgggtcggcaagaaggccgtc
ggccaggaagtcatgcagagcctgacgccgggccaccaggtcgtgaaagtggtctgggac
gaactccgcgccatgatgggcggggagaaggccgggcttgcactatcgtcggcgccgccg
accgtcgtcatgatggtcggactccaaggcgccggcaagaccacgacctgcggcaagctg
gcccggttcttcaaacagcaaggccggcgcgtgctgctggttgcggcagatccccgccgc
cccgccgcaggcgatcaattggcgtctttgggacgggatcttcagatcgacgtgcaccgg
caggaccaggccggggcttcgcagaccgacgtcgtgcgcatctgtcaagacggcgtccgg
cgcggaacggaccaggggttcgacgtggtcgtactggatacgggcgggcgcctgcatgtc
gacgatgagttgatgggcgaactcgtcgcggtgaaagccgcggtgaaaccccacgaagtg
ctgctggtcgccgacgccatgaccggacaggacgcggtcaacatggccacgcagtttcac
gagcgcgtcggggtgacgggcatcatcctcaccaaagtggaaggcgatgcgcggggcggc
gccgtgctctccatccgtgcggtgaccggccagccgatcaagttcctgggcgtcggggaa
aagctcgatgcgctggaactgttccatccggaccgcatggcgtcccgtattctggggatg
ggcgacgtgctgtccctgatcgagaaggcgcaggaaacgttcacgcgcgagcaggcggaa
gaagcgcagaagcggctgacgagcaatacctttacgctggaggatttccgcgcccagttg
gcacaggtcaacaagctcggctcgttggatcagatcctgggcatgctgccggggggccag
aagctccgcggagccatggaggggcaggtgccggaacgggagatgaagcgcgtcgtcgcg
atcatcgattcgatgacccggcgggagcggcgcgaccatacgctcatcaacggcagccgc
aagaagcggatcgcgcgcgggagcgggaccaacgtgatggaagtcaaccgcctgatcaag
cagtttctctcggcgcgcaagctcgccaagatgctgacgggcgcgagcggccgccgccaa
ttggcgcagctgctgaactcgaggtaa
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