Nitrospira japonica: NSJP_0264
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Entry
NSJP_0264 CDS
T05001
Symbol
serA
Name
(GenBank) D-3-phosphoglycerate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
nja
Nitrospira japonica
Pathway
nja00260
Glycine, serine and threonine metabolism
nja00270
Cysteine and methionine metabolism
nja00680
Methane metabolism
nja01100
Metabolic pathways
nja01110
Biosynthesis of secondary metabolites
nja01120
Microbial metabolism in diverse environments
nja01200
Carbon metabolism
nja01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
NSJP_0264 (serA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NSJP_0264 (serA)
00270 Cysteine and methionine metabolism
NSJP_0264 (serA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nja04147
]
NSJP_0264 (serA)
Enzymes [BR:
nja01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
NSJP_0264 (serA)
1.1.1.399 2-oxoglutarate reductase
NSJP_0264 (serA)
Exosome [BR:
nja04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
NSJP_0264 (serA)
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Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
PGDH_inter
ACT
AdoHcyase_NAD
RS_preATP-grasp-like
XdhC_C
KARI_N
NAD_binding_2
AlaDh_PNT_C
UDPG_MGDP_dh_C
Motif
Other DBs
NCBI-ProteinID:
SLM46436
UniProt:
A0A1W1I0B3
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Position
I:complement(264989..266572)
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AA seq
527 aa
AA seq
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MKILVSDSLSKQGVELLEKAGFTVVVKSKMPKDELFKEIKDADGLIVRSGTKVTEELLAA
ADKLKVVGRAGSGLDNVDTPAATRRGIVVMNTPGGNTVTTAEHTLSMICAMSRRIPQATA
STKGGKWEKDKFMGVELYNKVLGIVGVGQIGSHLTKLAHGIGMRVIAYDPFLASDRAERM
GVEMVDLHDLFRRADIISVHTPLTPETKGIINAQTIATMKPGVMIVNCARGGIVHEGDLF
DALKNKHVAAAAFDVFEEEPVKAENPLLTLDNFICTPHIGAQTTEAQENVAVGIAEQIAD
YFKKGIARGAVNIPSVSPELLPRLQPYLSLAEQLGKLQTQLCEGGLEHVTVEYSGEVAGL
SVAPLTIAVLKGLLTPVMEAPVNYVNAPIVAKERGIEVKEIRSSDAGDFTSLIRVRVEAG
KVSHQVAGTLYHKKDPRVVEIDQFKVEVVPEGNMLLIHNIDRPGVIGMVGKVLGDESINI
VRMQCALEKRGGNALLIIGSDQVFPGTVLNAIKSNQHILSVKVANLS
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctggtcagcgacagtctctcgaagcaaggtgtcgagctcctcgagaaagcg
ggctttacggtagtcgtgaagtccaagatgccgaaagacgagctttttaaggagattaag
gacgccgatggattgatcgtacggtccggcaccaaagtgacggaagagctgcttgccgcg
gccgataagctgaaagtcgttggtcgggccggttccggcttggacaatgtcgatactccg
gcggcaacccgccgcggaatcgtcgtcatgaatacaccgggcggcaatacggtcacgacc
gccgaacatacgctttcgatgatttgcgccatgagccgacgcatccctcaggccactgcc
tccaccaagggggggaagtgggagaaagacaagttcatgggggttgagctctacaataag
gtgttgggaatcgtcggagtcgggcaaatcgggagtcatctgacaaaattggcccacggt
atcgggatgcgagtgatcgcctatgaccccttcctggccagtgatcgggccgagcgaatg
ggggtggagatggtggatctccacgatttattccgccgtgccgacattatttccgtgcac
acgccgctgacgcccgaaaccaagggcatcatcaacgcccagacgatcgcgacgatgaag
cccggggtgatgatcgtaaattgcgcgcgcggaggcatcgtgcatgaaggcgatctgttc
gacgcgttgaagaacaaacacgttgcggcggccgcatttgacgtgttcgaagaagaaccg
gtcaaggcggagaatcccctgctgaccctcgataactttatctgtactcctcatatcggc
gcgcagacaacggaggcgcaggagaacgttgccgtcgggattgccgagcaaattgctgat
tatttcaagaaggggattgcgcgcggggccgtgaatatcccatcggtttcgcccgaattg
cttccgaggcttcagccctatctatcgctggccgagcaactggggaagttgcagacgcag
ttgtgcgagggagggctggagcatgtgaccgtggagtacagcggagaggtcgccgggctg
tcggtggctcctctgacgattgccgtgttgaagggactactgactccggtcatggaggcc
cccgtcaactatgtgaatgcgccgatcgtggccaaggaacgcgggattgaagtcaaagag
attcgcagttccgatgccggagactttaccagcctgatcagggtgcgcgtcgaggctgga
aaagtgtctcatcaagtcgccggtacgctctatcataagaaagatccccgggtggttgaa
atcgatcaattcaaggtcgaagtggttcccgaaggcaacatgttactgattcataatatt
gatcgccccggtgtcattggaatggtgggcaaagtgctgggggacgagagcatcaacatc
gttcgaatgcagtgcgcgctggaaaagcgcggaggaaatgcgctgctgatcatcggatcc
gaccaggtgtttcccggtacggtcttgaatgcgatcaagtcgaatcagcatattctctcg
gtcaaagtcgcgaacctttcctaa
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