Nitrospira japonica: NSJP_0478
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Entry
NSJP_0478 CDS
T05001
Symbol
xseB
Name
(GenBank) Exodeoxyribonuclease 7 small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
nja
Nitrospira japonica
Pathway
nja03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NSJP_0478 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nja03400
]
NSJP_0478 (xseB)
Enzymes [BR:
nja01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
NSJP_0478 (xseB)
DNA repair and recombination proteins [BR:
nja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NSJP_0478 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
CDH1_2_SANT_HL1
Motif
Other DBs
NCBI-ProteinID:
SLM46650
UniProt:
A0A1W1I0W6
LinkDB
All DBs
Position
I:complement(458180..458434)
Genome browser
AA seq
84 aa
AA seq
DB search
MKFEQAIARLESIVGELEKGDLPLDESLKIFEEGIRLSKSCLKILEDAERKVEVLVQEQN
GKKRLHAFTQDLGDGSSSSGSNGQ
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
gtgaagtttgaacaggccattgcgcgtttggagtcgatcgtcggcgaattggagaagggc
gatctcccgcttgacgaatctctcaagatcttcgaggaagggattcgtctctccaagagc
tgtctcaagattcttgaggacgcggaacgcaaagtcgaagtgttagtgcaagagcagaac
ggaaagaaacggctccatgcctttacccaagaccttggggatggctcttcgtcgtccgga
tccaacggtcagtaa
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