Nitrospira japonica: NSJP_0680
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Entry
NSJP_0680 CDS
T05001
Symbol
phrA
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
nja
Nitrospira japonica
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nja03400
]
NSJP_0680 (phrA)
Enzymes [BR:
nja01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NSJP_0680 (phrA)
DNA repair and recombination proteins [BR:
nja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NSJP_0680 (phrA)
Prokaryotic type
NSJP_0680 (phrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
SLM46852
UniProt:
A0A1W1I1I7
LinkDB
All DBs
Position
I:631002..632447
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AA seq
481 aa
AA seq
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MRGIVWLRRDLRLSDQPALTAACEACSEVIPLFVFDDPLLRSKTFGSVCVNFMLGCLEDL
AASLAARGLPLQWRRGEPVEEVVTAAREWKVDVVYWNRDYEPAALLRDRAVQLQLAEQGV
EVRTFKDHVVFEADEVCGITGEPMQRYSAYRARWWTKWQAVKPTLLPIPRGLCVEKAVPL
PAPRPIPAARELGYEPLTPWIRAGEQHARKRLAWFVAEPIHAYVNSRNLPALDGSSKLSP
HFRFGTLSPRTAIHMALASLATGGRVSRPDVLTWIDELVWREFFQQVLSAFPRVAGGPFR
AIAVPPARESGPERDRFFQAWCDGQTGYPIVDAGMRQLNETGWMHNRVRMVVASFLIKDL
RLDWQCGERYFMQRLVDADVAANNGNWQWCASTGTDAMRGYRIFNPALQSKKFDPDGAYI
REYVRELDGAASKWIHEPHLMSPDEQVHARCRIGRDYPSPIIDHQQARREYLDLAKQQVK
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggcatcgtgtggctcagacgggatctcagactgtcggatcagccggccctgacg
gccgcctgcgaagcctgcagcgaggtaatcccactctttgtcttcgacgaccctttgctg
cggtcgaagaccttcggatccgtctgcgtgaatttcatgctcggctgcctggaggatctg
gctgcgtcattggccgctcgaggcctcccgctccagtggcgtcgcggcgagcccgtggaa
gaagtggtgactgccgcgcgtgaatggaaggtcgacgtggtctattggaatcgggattat
gaaccggccgcgctcctgcgtgaccgggcggttcagctccagcttgccgaacagggagta
gaagtccgcacgttcaaggaccacgttgtcttcgaggcagacgaggtttgcggcatcacc
ggcgagccgatgcaacgatacagtgcctatcgggcgcgctggtggaccaagtggcaggcg
gtgaagccgacgctcctcccgattccgagagggttatgcgtggagaaagcggtaccactc
cctgctccccgtccgatcccggcagcccgtgagctgggatatgaaccgctgacgccctgg
atcagggccggtgaacaacacgctcgaaagaggctggcctggtttgttgcggagccgatt
cacgcctacgtgaacagccggaatcttccagccctcgacggcagttcgaaactctcaccg
catttccgctttggaacattgtcgcctcgcaccgccatccatatggcgttggccagtctc
gcaacaggcggtcgcgtctcccgtcccgatgtgctcacctggattgatgaactggtttgg
cgcgaattctttcagcaagtgctgtcggccttcccgcgcgtcgcgggcggccctttccgg
gccattgctgtgccgccggcacgtgaatcgggcccggaacgagacaggttctttcaggcc
tggtgcgacgggcagaccggttatcccatcgtggatgccggcatgcggcaactcaatgag
acgggctggatgcacaatcgcgtgcgcatggtcgtcgcatcgtttctgatcaaggatttg
cgactggactggcagtgcggcgaacgctatttcatgcagcggctggttgacgccgacgtt
gcggcgaacaacggcaattggcagtggtgtgcgtcgacggggacggacgccatgcgcggg
taccggattttcaatcccgctctgcagagcaagaaattcgatccggacggtgcctacatt
cgggaatatgtgcgggagctggacggagcagcttcgaagtggatccacgagccgcatctc
atgagtcctgatgagcaggttcacgcccgatgcagaatcgggcgcgattacccttcgccg
atcatcgatcatcaacaagcgcgcagggagtacttggatctggccaaacagcaggtgaag
cgatga
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integrated database retrieval system
