Nitrospira japonica: NSJP_0763
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Entry
NSJP_0763 CDS
T05001
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nja
Nitrospira japonica
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nja03016
]
NSJP_0763 (truB)
Enzymes [BR:
nja01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NSJP_0763 (truB)
Transfer RNA biogenesis [BR:
nja03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NSJP_0763 (truB)
Prokaryotic type
NSJP_0763 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
Motif
Other DBs
NCBI-ProteinID:
SLM46935
UniProt:
A0A1W1I1R5
LinkDB
All DBs
Position
I:complement(709146..710096)
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AA seq
316 aa
AA seq
DB search
MMTNVAQSTLDGVLTVCKEVGWTSHDVVAKIRHVLGGAKVGHAGTLDPAATGVLPVLIGR
GTRIAEYLVEWDKEYRAVLRLGETTDTQDATGTLVDRQFTGHITPAAIREVASRFQGAIE
QVPPMYSAVKVAGVPLYKSARAGKTVARQARTVTVHSLDILEIDGQNVTLRVVCSKGTYV
RTLCADLGAALGVGGHLLSLERSRVGPLMLDQASTVDEVVARYAIGDLGTAVISLDQALK
AFPVVVVDDLATERIRHGAPVQMSHVRDIPEDRHAVAESDQPVRVHDGEGRLLAIGKYRV
SNEMVLAVEKLLVEPR
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgaacgtggcgcagagtaccttggacggtgtcctgacggtgtgcaaggaagtc
gggtggacgtcgcatgacgtggtggccaagatccggcacgtcctcggaggagccaaggtt
ggacatgcggggacactggatcccgcagcgaccggcgtgttgcccgtcctgatcggacgg
ggaacgcgtatcgccgagtatctcgtcgagtgggacaaggaatatcgcgcggtgcttcgc
ctcggtgaaaccaccgatacgcaggatgcgaccgggactttggttgatcggcagttcacg
ggtcacataacgccggcagcgatccgagaggtcgccagtcgatttcaaggcgctattgag
caggtccctccgatgtattcggccgtcaaagtcgcaggagtacctttatacaagtccgct
cgggcgggaaagacagtcgcgaggcaggcaagaaccgtcacggttcactcgctcgacatt
ctcgagattgacggacagaatgtgacccttcgtgtcgtgtgttccaagggcacgtacgtc
agaacattgtgcgcggacctcggcgcggcattgggcgtcggcggtcatctgctgtcactg
gagcgcagtcgcgtcgggccgctcatgctggatcaggcatcgaccgtggatgaagtggtc
gcgcgttatgccatcggcgatctcggaacagccgtcatttcgcttgaccaggcgctcaaa
gcatttccggtcgtcgtcgtggacgaccttgcgaccgaacggatacgtcacggcgctccg
gttcagatgagccacgttcgggatatccccgaggatcggcacgcagttgcggaatccgat
caaccggttcgcgttcatgacggggaagggcgacttctggcgatcgggaagtatcgcgtt
tcgaacgagatggtattggcggtcgaaaaattattggttgagccacgctga
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integrated database retrieval system
