Nitrospira japonica: NSJP_0792
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Entry
NSJP_0792 CDS
T05001
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nja
Nitrospira japonica
Pathway
nja03030
DNA replication
nja03410
Base excision repair
nja03420
Nucleotide excision repair
nja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NSJP_0792 (polA)
03410 Base excision repair
NSJP_0792 (polA)
03420 Nucleotide excision repair
NSJP_0792 (polA)
03440 Homologous recombination
NSJP_0792 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nja03032
]
NSJP_0792 (polA)
03400 DNA repair and recombination proteins [BR:
nja03400
]
NSJP_0792 (polA)
Enzymes [BR:
nja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NSJP_0792 (polA)
DNA replication proteins [BR:
nja03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NSJP_0792 (polA)
DNA repair and recombination proteins [BR:
nja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NSJP_0792 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NSJP_0792 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
SLM46964
UniProt:
A0A1W1I1U9
LinkDB
All DBs
Position
I:complement(732712..735363)
Genome browser
AA seq
883 aa
AA seq
DB search
MTPTDAQPRTLYLIDGSAYVYRAFFALPPLITSKGLQTNAVYGFTTTLMKIVREHGPDCL
AVAFDERGPTLRHEEFKEYKAQRPPMPEGMQAQVPYIHRLVEAFSIPVVRHVGYEADDLI
GTLARQAEAAGYDVVIVTGDKDMFQLLTPHIRIFDPVKNKWSGEAECLERFGVEPSRVVE
VMGLMGDSTDNIPGVKGIGEKTAVKLLSQFGTIEELLRRVDEVTPPRVRALLAEQGESAK
LSRRLATIVLDAPVQFDPSRYAARIPQPDRLAELFRELEFTTLLKSLQPAPEPVQPVAAA
FDVVSDEETARRFVEQLPEGGVIGVRCLLAGGSGVLASMQGMALSSGDKTAFFPLDVQTY
MRPITSLLNDGTRPKIVHDLKTTLLAFHRMGITLAGPYMDVMVADYLLNPNRRDHQLDTV
AFEVLGRRPGSGQAAAPRSLFDADVGSRSETVEAASVLALLGPALTERLAGQGSVMLFRD
VEMPLVPVLTEIERNGFLLDVQELHELGKEMERELDRMMETITALAGGEFNINSPKQLAA
VLFERLGLKPLRKTKTGYSTDEETLTQLAAQHSLPEQILNYRSVSKLKSTYVDALPALIS
PETKRLHTSLNQTVAATGRLSSTDPNLQNIPVKGNYGIRIREAFIASKGHELLCADYSQI
EPRILAHLSQDPRLIEVFAKGEDIHMATAMEIFGLPSGQITRDMRRAAKTVVFGIVYGIS
PFGLSQNIGVPQAEARKYIETFFEKFAAVRALMDRNIAEGKDKGYTTTILGRRRPIPELR
SGDPVQRGVGERMAVNSPIQGSAADLIKIAMINVHRRLHKDLPHTKMILQVHDELIFEVP
EKEMAEAQALVKGEMEGVGSQLGLSVPLKVDMGVGKNWRVAHP
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgactcccactgacgcacaaccacgcacgctctatctgattgacgggagcgcgtatgtc
tatcgcgcgttcttcgccctgcctccgttgatcacgtcgaaagggcttcaaaccaatgcc
gtgtacggttttaccacgacgttgatgaagatcgtccgcgagcacggcccggattgcctc
gccgtggccttcgacgaaaggggtcccacgctccggcatgaggaattcaaggaatacaag
gcccaacgcccgccgatgccggaagggatgcaagcgcaggtgccgtacatccatcgcctc
gtcgaagccttctcgatacccgtggtcaggcacgtcggctacgaagcagacgacctgatc
ggaaccttggcgcgccaagcggaagccgcgggctacgacgtcgttatcgtgacgggcgac
aaagacatgtttcaattgttgactccgcatatccggatcttcgatccggtcaagaacaag
tggtcgggggaagcggagtgcctggaacggttcggcgtcgagccgtctcgtgtcgtcgag
gtgatgggcttgatgggagacagcacggacaacattcccggcgtaaaaggaatcggcgaa
aagaccgcggtcaagctcctgtcgcaatttggaacgatcgaggaattgctgcgtcgcgtc
gatgaggtgacgccgcctcgcgtgcgggccttgctggccgaacagggtgagagcgcaaag
ctgagccgacggctcgccaccatcgtcctcgatgctcccgtgcagtttgatccttctcgg
tatgcggcccggattccacagcccgatcgcctcgcggagttgttcagggagttggaattc
acgaccttgctgaaatcccttcagccggcgcccgagccggtccaaccggtcgcggcggcg
ttcgacgtggtgtccgacgaggagaccgcgcggcgcttcgtcgagcaactgcccgaaggc
ggggtgatcggcgttcgttgtcttctggcgggaggcagtggggtgcttgcctcgatgcag
ggcatggcgttgtcatcgggagacaagacggcgttctttccgctcgacgtacaaacctac
atgaggccgattacgtcgctgttgaacgacggcacgcgacccaagatcgtccatgacctg
aaaacgacgctgctggcctttcatcgcatgggcatcacattggccgggccttatatggac
gtcatggtggcggactatctcctcaaccccaaccgacgcgaccatcagctggacacagtg
gcattcgaggtcctgggccggcgacccggttccgggcaggcggccgcgccccggtctctg
ttcgatgcggatgtcggatcgcgctcggaaacggttgaagccgcctcggttctggcgctt
ctcggtcccgcattgaccgagcggctggcggggcaggggagcgtgatgctttttcgcgac
gtcgaaatgccgctcgtgcccgtgctgactgaaatcgaacggaacggattcttgctggac
gtccaggaattgcacgaactcggcaaggagatggagcgcgagctggaccgcatgatggaa
accatcacggcattggcaggaggcgagttcaatatcaattccccgaagcagttggccgcc
gtcttgttcgagcggctgggtttgaagcccctccgtaaaaccaagacgggctattcgacg
gatgaagagaccttgacccagttggccgcccagcacagcttgccggagcagatcctgaac
tatcgcagcgtcagcaaactcaaatcgacctacgtcgacgcgctgccggcgttgatcagt
ccggaaaccaaacgtctgcatacctcgctcaatcaaacggtcgccgccaccggccggttg
tcgtcgaccgatccgaatctccagaatattccggtcaagggaaactacgggatccggatc
cgcgaagccttcatcgcgtccaaggggcacgagctgctctgcgccgactacagtcagatc
gagccgcgcatcttggcgcatctttcccaggatcctcgcttgatagaggtgttcgccaaa
ggcgaggatatccacatggccaccgcgatggagatcttcgggcttccttccggacaaatt
acgcgggacatgcgccgggccgccaagaccgtagtcttcgggatcgtctacggcatcagt
ccgttcgggctttcgcagaacatcggtgtgccgcaggccgaggcgaggaagtacatcgag
acattctttgaaaaatttgccgccgtacgggcgctcatggatcgaaacatcgccgaaggc
aaagacaaaggctacacgacgacgatcctgggccggcgccggccgatccccgaactgcga
agcggtgatcccgtgcagagaggggtcggtgaacgcatggcggtgaacagccccattcaa
ggatccgccgccgatctgatcaaaatcgccatgatcaacgtccaccggcggcttcacaag
gatctcccgcacaccaagatgatcctgcaggttcacgatgaattgatctttgaggtcccc
gagaaggagatggctgaggcacaggccctggtcaaaggggaaatggagggagtgggatcg
cagctcggcctatcggtgccgctgaaagtcgatatgggagtgggcaagaattggcgggtg
gctcatccttga
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